RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 HFEQ30201 348 aa12.82□□□□□ -0.36
FDPS-213ENST00000489003 RDH10Q8IZV5 341 aa12.82□□□□□ -0.36
FDPS-213ENST00000489003 SPERTQ8NA61 448 aa12.82□□□□□ -0.36
FDPS-213ENST00000489003 ZNF540Q8NDQ6 660 aa12.82□□□□□ -0.36
FDPS-213ENST00000489003 SEMA6DQ8NFY4 1073 aa12.82□□□□□ -0.36
FDPS-213ENST00000489003 OR14K1Q8NGZ2 314 aa12.82□□□□□ -0.36
FDPS-213ENST00000489003 CCL17Q92583 94 aa12.82□□□□□ -0.36
FDPS-213ENST00000489003 CAB39Q9Y376 341 aaPredicted RBP12.82□□□□□ -0.36
FDPS-213ENST00000489003 EXOSC1Q9Y3B2 195 aaKnown RBP12.82□□□□□ -0.36
FDPS-213ENST00000489003 PCDHGB5Q9Y5G0 923 aa12.82□□□□□ -0.36
FDPS-213ENST00000489003 HIVEP1P15822 2718 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 A0A096LNT2 108 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 PTGES3LE9PB15 166 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 SMAD7O15105 426 aaKnown RBP12.81□□□□□ -0.36
FDPS-213ENST00000489003 MTRF1O75570 445 aaKnown RBP12.81□□□□□ -0.36
FDPS-213ENST00000489003 DHRS3O75911 302 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 CCL1P22362 96 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 CD200P41217 278 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 ALKBH1Q13686 389 aaKnown RBP12.81□□□□□ -0.36
FDPS-213ENST00000489003 SNCBQ16143 134 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 OR2G6Q5TZ20 316 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 AHSA2Q719I0 299 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 COMMD2Q86X83 199 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 KLBQ86Z14 1044 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 STX19Q8N4C7 294 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 CELF2-AS1Q8N7Q2 184 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 MAPK1IP1LQ8NDC0 245 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 PIGCQ92535 297 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 PIMREGQ9BSJ6 248 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 BPESC1Q9GZL8 116 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 GCM1Q9NP62 436 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 DCAF16Q9NXF7 216 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 SCN3BQ9NY72 215 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 NOP16Q9Y3C1 178 aaKnown RBP12.81□□□□□ -0.36
FDPS-213ENST00000489003 MPC1Q9Y5U8 109 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 V9GYS6 101 aa12.81□□□□□ -0.36
FDPS-213ENST00000489003 ACANP16112 2415 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 ZNF816-ZNF321PA0A0X1KG74 233 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 LOC100289279A0A1B0GTE1 492 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 OR4C45A6NMZ5 311 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 ZNF850A8MQ14 1090 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 H3BSH0 61 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 SLC1A7O00341 560 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 FOSL1P15407 271 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 MYL12AP19105 171 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 GPR6P46095 362 aaPredicted RBP12.8□□□□□ -0.36
FDPS-213ENST00000489003 GTF2A1P52655 376 aaPredicted RBP12.8□□□□□ -0.36
FDPS-213ENST00000489003 GBX2P52951 348 aaPredicted RBP12.8□□□□□ -0.36
FDPS-213ENST00000489003 PRDX4Q13162 271 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 PRAMEF6Q5VXH4 476 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 TMPRSS11AQ6ZMR5 421 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 DOK3Q7L591 496 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 MOGAT3Q86VF5 341 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 KLHL36Q8N4N3 616 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 ZNF420Q8TAQ5 688 aaPredicted RBP12.8□□□□□ -0.36
FDPS-213ENST00000489003 C18orf12Q96KH6 178 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 COX4I2Q96KJ9 171 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 CNBD2Q96M20 576 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 ZNF184Q99676 751 aaPredicted RBP12.8□□□□□ -0.36
FDPS-213ENST00000489003 ADAT1Q9BUB4 502 aaKnown RBP12.8□□□□□ -0.36
FDPS-213ENST00000489003 PAPOLGQ9BWT3 736 aaKnown RBP12.8□□□□□ -0.36
FDPS-213ENST00000489003 DUSP21Q9H596 190 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 TMEM106BQ9NUM4 274 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 CHCHD3Q9NX63 227 aaKnown RBP12.8□□□□□ -0.36
FDPS-213ENST00000489003 BABAM2Q9NXR7 383 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 PPP1R3CQ9UQK1 317 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 PIGLQ9Y2B2 252 aa12.8□□□□□ -0.36
FDPS-213ENST00000489003 IGHV4-61A0A0C4DH41 118 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 A0A1B0GVI7 797 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 A6NIN4 97 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 PPIHO43447 177 aaKnown RBP12.79□□□□□ -0.36
FDPS-213ENST00000489003 SYT7O43581 403 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 DENRO43583 198 aaKnown RBP12.79□□□□□ -0.36
FDPS-213ENST00000489003 PTBP3O95758 552 aaKnown RBP12.79□□□□□ -0.36
FDPS-213ENST00000489003 ISG15P05161 165 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 CDK1P06493 297 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 FAHP16930 419 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 USF1P22415 310 aaPredicted RBP12.79□□□□□ -0.36
FDPS-213ENST00000489003 GNALP38405 381 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 GATA4P43694 442 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 TGM4P49221 684 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 LOXL1Q08397 574 aaPredicted RBP12.79□□□□□ -0.36
FDPS-213ENST00000489003 MRPL28Q13084 256 aaKnown RBP12.79□□□□□ -0.36
FDPS-213ENST00000489003 MED21Q13503 144 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 MPPED2Q15777 294 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 ZBTB37Q5TC79 503 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 TMEM244Q5VVB8 128 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 C11orf53Q8IXP5 236 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 FTMTQ8N4E7 242 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 ZNF485Q8NCK3 441 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 CCDC54Q8NEL0 328 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 OR8S1Q8NH09 359 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 GATAD2BQ8WXI9 593 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 OR5P3Q8WZ94 311 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 SGCDQ92629 289 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 ITPKCQ96DU7 683 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 FGF23Q9GZV9 251 aaPredicted RBP12.79□□□□□ -0.36
FDPS-213ENST00000489003 RASSF4Q9H2L5 321 aa12.79□□□□□ -0.36
FDPS-213ENST00000489003 PAK1IP1Q9NWT1 392 aaPredicted RBP12.79□□□□□ -0.36
FDPS-213ENST00000489003 UBAP1Q9NZ09 502 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms