RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 WDR34Q96EX3 536 aa1.71□□□□□ -2.14
CD46-215ENST00000488596 KCNS1Q96KK3 526 aa1.71□□□□□ -2.14
CD46-215ENST00000488596 CSPG4P5Q96PW8 444 aa1.71□□□□□ -2.14
CD46-215ENST00000488596 KCNS3Q9BQ31 491 aa1.71□□□□□ -2.14
CD46-215ENST00000488596 AGMATQ9BSE5 352 aa1.71□□□□□ -2.14
CD46-215ENST00000488596 MARVELD1Q9BSK0 173 aa1.71□□□□□ -2.14
CD46-215ENST00000488596 DEFB129Q9H1M3 183 aa1.71□□□□□ -2.14
CD46-215ENST00000488596 OR2AG1Q9H205 316 aa1.71□□□□□ -2.14
CD46-215ENST00000488596 DHX35Q9H5Z1 703 aaKnown RBP1.71□□□□□ -2.14
CD46-215ENST00000488596 PLEKHG2Q9H7P9 1386 aa1.71□□□□□ -2.14
CD46-215ENST00000488596 ADGRA3Q8IWK6 1321 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 M0R1X1 148 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 CHMP2AO43633 222 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 FARS2O95363 451 aaKnown RBP1.7□□□□□ -2.14
CD46-215ENST00000488596 TACSTD2P09758 323 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 CD28P10747 220 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 THRAP10827 490 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 RALBP11234 206 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 PRKACBP22694 351 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 CCT6AP40227 531 aaKnown RBP1.7□□□□□ -2.14
CD46-215ENST00000488596 OR1G1P47890 313 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 UBE2E1P51965 193 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 CLDN8P56748 225 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 CLDN18P56856 261 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 RAB11AP62491 216 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 FUT5Q11128 374 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 RAB11BQ15907 218 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 C5orf64Q2M2E5 130 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 C6orf99Q4VX62 202 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 KLHL12Q53G59 568 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 FAM222AQ5U5X8 452 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 TMEM236Q5W0B7 351 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 TTC19Q6DKK2 380 aaPredicted RBP1.7□□□□□ -2.14
CD46-215ENST00000488596 DRAM1Q8N682 238 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 SPANXA2-OT1Q8N9U9 137 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 ST20-AS1Q8NBB2 130 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 KIAA1143Q96AT1 154 aaPredicted RBP1.7□□□□□ -2.14
CD46-215ENST00000488596 TMEM159Q96B96 161 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 RCN3Q96D15 328 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 GPR82Q96P67 336 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 TOLLIPQ9H0E2 274 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 REEP1Q9H902 201 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 ADA2Q9NZK5 511 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 ZMAT5Q9UDW3 170 aaKnown RBP1.7□□□□□ -2.14
CD46-215ENST00000488596 ZNF257Q9Y2Q1 563 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 LRRC42Q9Y546 428 aa1.7□□□□□ -2.14
CD46-215ENST00000488596 SCN1AP35498 2009 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 ARPC4-TTLL3A0A0A6YYG9 625 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 IGHV1-3A0A0C4DH29 117 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 CEACAM18A8MTB9 384 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 H0YIV9 168 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 CTNSO60931 367 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 HSBP1O75506 76 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 HSPD1P10809 573 aaKnown RBP1.69□□□□□ -2.14
CD46-215ENST00000488596 APLNRP35414 380 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 BCAP31P51572 246 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 OR2B8PP59922 312 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 PAFAH1B2P68402 229 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 LCN2P80188 198 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 IFITM3Q01628 133 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 NAB1Q13506 487 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 DOC2AQ14183 400 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 LUZP6Q538Z0 58 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 KPRPQ5T749 579 aaPredicted RBP1.69□□□□□ -2.14
CD46-215ENST00000488596 TMPRSS11AQ6ZMR5 421 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 MRPL21Q7Z2W9 205 aaKnown RBP1.69□□□□□ -2.14
CD46-215ENST00000488596 ERO1BQ86YB8 467 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 LYPD1Q8N2G4 141 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 STK40Q8N2I9 435 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 SLC35G3Q8N808 338 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 OR1L1Q8NH94 360 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 PIH1D2Q8WWB5 315 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 RXFP2Q8WXD0 754 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 NAT6Q93015 286 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 CERS2Q96G23 380 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 UBE2E2Q96LR5 201 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 IP6K3Q96PC2 410 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 GABRG3Q99928 467 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 RHOXF2Q9BQY4 288 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 CHCHD7Q9BUK0 85 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 BLZF1Q9H2G9 400 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 ZSCAN16Q9H4T2 348 aaPredicted RBP1.69□□□□□ -2.14
CD46-215ENST00000488596 CRLF2Q9HC73 371 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 RPRD1BQ9NQG5 326 aaKnown RBP1.69□□□□□ -2.14
CD46-215ENST00000488596 DYRK4Q9NR20 520 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 CHRAC1Q9NRG0 131 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 TMEM100Q9NV29 134 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 PSME2Q9UL46 239 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 ANKRD12Q6UB98 2062 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 ZNF608Q9ULD9 1512 aaPredicted RBP1.69□□□□□ -2.14
CD46-215ENST00000488596 GPR179Q6PRD1 2367 aa1.69□□□□□ -2.14
CD46-215ENST00000488596 NEURL4Q96JN8 1562 aa1.68□□□□□ -2.14
CD46-215ENST00000488596 A0A0B4J2E0 115 aa1.68□□□□□ -2.14
CD46-215ENST00000488596 CCL15-CCL14A0A0B4J2E2 113 aa1.68□□□□□ -2.14
CD46-215ENST00000488596 LOC100653049A0A140TA62 436 aa1.68□□□□□ -2.14
CD46-215ENST00000488596 A0A1B0GUH1 482 aa1.68□□□□□ -2.14
CD46-215ENST00000488596 ZNF98A6NK75 572 aa1.68□□□□□ -2.14
CD46-215ENST00000488596 SLC22A20A6NK97 555 aa1.68□□□□□ -2.14
CD46-215ENST00000488596 HACD1B0YJ81 288 aa1.68□□□□□ -2.14
CD46-215ENST00000488596 H3BN98 237 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms