RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 A0A1W2PPE2 198 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 CDC14CA4D256 554 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 IFITM10A6NMD0 228 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 UMAD1C9J7I0 102 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 SCDO00767 359 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 CLPSP04118 112 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 HKR1P10072 659 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 CAPZBP47756 277 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 IGLV3-21P80748 117 aaPredicted RBP12.62□□□□□ -0.39
RER1-207ENST00000488353 FAM3AP98173 230 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.62□□□□□ -0.39
RER1-207ENST00000488353 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.62□□□□□ -0.39
RER1-207ENST00000488353 SLC18B1Q6NT16 456 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 HEPN1Q6WQI6 88 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 PPP1R3BQ86XI6 285 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 KDM8Q8N371 416 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 OR10C1Q96KK4 312 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 TGM7Q96PF1 710 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 ADOQ96SZ5 270 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 EIF5A2Q9GZV4 153 aaKnown RBP12.62□□□□□ -0.39
RER1-207ENST00000488353 NXF5Q9H1B4 397 aaKnown RBP12.62□□□□□ -0.39
RER1-207ENST00000488353 PRDM13Q9H4Q3 707 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 C5orf66Q9H5L9 145 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 FAM212BQ9NTI7 297 aaPredicted RBP12.62□□□□□ -0.39
RER1-207ENST00000488353 FREM3P0C091 2139 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 ASXL3Q9C0F0 2248 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 SLC31A2O15432 143 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 ZNF264O43296 627 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 WISP1O95388 367 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 UTS2O95399 124 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 CD27P26842 260 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 UCP2P55851 309 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 ROM1Q03395 351 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 IL15RAQ13261 267 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 KCTD18Q6PI47 426 aaPredicted RBP12.62□□□□□ -0.39
RER1-207ENST00000488353 ZNF440Q8IYI8 595 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 OR13C3Q8NGS6 347 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 SLC25A36Q96CQ1 311 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 RHOVQ96L33 236 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 OR8D2Q9GZM6 311 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 SOHLH2Q9NX45 425 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 HHLA2Q9UM44 414 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 MEMO1Q9Y316 297 aa12.62□□□□□ -0.39
RER1-207ENST00000488353 MUC3AQ02505 3323 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 A0A1W2PR77 199 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 METTL12A8MUP2 240 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 SCGNO76038 276 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 SLC2A1P11166 492 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 TAS2R60P59551 318 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 S100A10P60903 97 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 MFGE8Q08431 387 aaPredicted RBP12.61□□□□□ -0.39
RER1-207ENST00000488353 TOMM34Q15785 309 aaPredicted RBP12.61□□□□□ -0.39
RER1-207ENST00000488353 MIDNQ504T8 468 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 FNDC7Q5VTL7 733 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 REC114Q7Z4M0 266 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 CATSPERDQ86XM0 798 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 PNLDC1Q8NA58 520 aaKnown RBP12.61□□□□□ -0.39
RER1-207ENST00000488353 POC1AQ8NBT0 407 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 AKR7LQ8NHP1 331 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 RNASE11Q8TAA1 199 aaKnown RBP12.61□□□□□ -0.39
RER1-207ENST00000488353 MAFIPQ8WZ33 124 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 TMEM230Q96A57 120 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 MARS2Q96GW9 593 aaKnown RBP12.61□□□□□ -0.39
RER1-207ENST00000488353 SCGB3A2Q96PL1 93 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 GAL3ST4Q96RP7 486 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 SCRT1Q9BWW7 348 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 GSKIPQ9P0R6 139 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 TMEM131Q92545 1883 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 IGHV5-51A0A0C4DH38 117 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 CEACAM18A8MTB9 384 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 OR2C1O95371 312 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 RPS10P46783 165 aaKnown RBP12.61□□□□□ -0.39
RER1-207ENST00000488353 FASLGP48023 281 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 KCNJ16Q9NPI9 418 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 CUTCQ9NTM9 273 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 DCAF16Q9NXF7 216 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 PRODH2Q9UF12 536 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 B9D1Q9UPM9 204 aa12.61□□□□□ -0.39
RER1-207ENST00000488353 NSA2O95478 260 aaKnown RBP12.6□□□□□ -0.39
RER1-207ENST00000488353 NUDT14O95848 222 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 GNB3P16520 340 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 RPL12P30050 165 aaKnown RBP12.6□□□□□ -0.39
RER1-207ENST00000488353 NDUFA6P56556 154 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 RAP1AP62834 184 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 CDPF1Q6NVV7 123 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 LYPD6Q86Y78 171 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 CD300LFQ8TDQ1 290 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 S100PBPQ96BU1 408 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 PIGQQ9BRB3 760 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 AMDHD2Q9Y303 409 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 CABIN1Q9Y6J0 2220 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 K7EPK0 472 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 HCRTR2O43614 444 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 IFNA10P01566 189 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 CD81P60033 236 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 ANKRD55Q3KP44 614 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 ACTBL2Q562R1 376 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 DNLZQ5SXM8 178 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 OPN5Q6U736 354 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 FAM71E2Q8N5Q1 922 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms