RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PCGF1Q9BSM1 259 aa16.01■□□□□ 0.15
CD55-209ENST00000488171 PRDM13Q9H4Q3 707 aa16.01■□□□□ 0.15
CD55-209ENST00000488171 ZNF556Q9HAH1 456 aa16.01■□□□□ 0.15
CD55-209ENST00000488171 RNPEPL1Q9HAU8 725 aa16.01■□□□□ 0.15
CD55-209ENST00000488171 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16■□□□□ 0.15
CD55-209ENST00000488171 DVL1O14640 695 aa16■□□□□ 0.15
CD55-209ENST00000488171 LIPFP07098 398 aa16■□□□□ 0.15
CD55-209ENST00000488171 SLC2A5P22732 501 aa16■□□□□ 0.15
CD55-209ENST00000488171 ELF3P78545 371 aaPredicted RBP16■□□□□ 0.15
CD55-209ENST00000488171 FLOT2Q14254 428 aa16■□□□□ 0.15
CD55-209ENST00000488171 GPR157Q5UAW9 335 aa16■□□□□ 0.15
CD55-209ENST00000488171 SPATA24Q86W54 205 aa16■□□□□ 0.15
CD55-209ENST00000488171 ZNF454Q8N9F8 522 aa16■□□□□ 0.15
CD55-209ENST00000488171 CSNK2A3Q8NEV1 391 aa16■□□□□ 0.15
CD55-209ENST00000488171 TAF15Q92804 592 aaKnown RBP eCLIP16■□□□□ 0.15
CD55-209ENST00000488171 ITPKCQ96DU7 683 aa16■□□□□ 0.15
CD55-209ENST00000488171 PAPOLGQ9BWT3 736 aaKnown RBP16■□□□□ 0.15
CD55-209ENST00000488171 TLNRD1Q9H1K6 362 aa16■□□□□ 0.15
CD55-209ENST00000488171 RGCCQ9H4X1 137 aa16■□□□□ 0.15
CD55-209ENST00000488171 KAAG1Q9UBP8 84 aa16■□□□□ 0.15
CD55-209ENST00000488171 TCRBV3S1A0A5B6 114 aa16■□□□□ 0.15
CD55-209ENST00000488171 P2RY10O00398 339 aa16■□□□□ 0.15
CD55-209ENST00000488171 GYG2O15488 501 aa16■□□□□ 0.15
CD55-209ENST00000488171 HOXA3O43365 443 aaPredicted RBP16■□□□□ 0.15
CD55-209ENST00000488171 FKBP6O75344 327 aa16■□□□□ 0.15
CD55-209ENST00000488171 TIPRLO75663 272 aa16■□□□□ 0.15
CD55-209ENST00000488171 TOX4O94842 621 aa16■□□□□ 0.15
CD55-209ENST00000488171 ANXA8P13928 327 aa16■□□□□ 0.15
CD55-209ENST00000488171 ACKR3P25106 362 aa16■□□□□ 0.15
CD55-209ENST00000488171 NAA10P41227 235 aaPredicted RBP16■□□□□ 0.15
CD55-209ENST00000488171 BPIFB3P59826 476 aa16■□□□□ 0.15
CD55-209ENST00000488171 CBX1P83916 185 aa16■□□□□ 0.15
CD55-209ENST00000488171 DNAL1Q4LDG9 190 aa16■□□□□ 0.15
CD55-209ENST00000488171 TMEM236Q5W0B7 351 aa16■□□□□ 0.15
CD55-209ENST00000488171 RUSC1-AS1Q66K80 236 aa16■□□□□ 0.15
CD55-209ENST00000488171 BTN2A1Q7KYR7 527 aa16■□□□□ 0.15
CD55-209ENST00000488171 HIST2H2ABQ8IUE6 130 aaPredicted RBP16■□□□□ 0.15
CD55-209ENST00000488171 PNLDC1Q8NA58 520 aaKnown RBP16■□□□□ 0.15
CD55-209ENST00000488171 PAPD5Q8NDF8 572 aaKnown RBP16■□□□□ 0.15
CD55-209ENST00000488171 SLC7A6OSQ96CW6 309 aaPredicted RBP16■□□□□ 0.15
CD55-209ENST00000488171 LYZL4Q96KX0 146 aa16■□□□□ 0.15
CD55-209ENST00000488171 WDFY2Q96P53 400 aa16■□□□□ 0.15
CD55-209ENST00000488171 SIRPDQ9H106 197 aa16■□□□□ 0.15
CD55-209ENST00000488171 DNAJB9Q9UBS3 223 aa16■□□□□ 0.15
CD55-209ENST00000488171 A0A1B0GW55 424 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 TMPRSS2O15393 492 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 SPRY1O43609 319 aaPredicted RBP15.99■□□□□ 0.15
CD55-209ENST00000488171 DUX4L2P0CJ85 424 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 DUX4L3P0CJ86 424 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 DUX4L4P0CJ87 422 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 DUX4L5P0CJ88 424 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 DUX4L6P0CJ89 424 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 DUX4L7P0CJ90 424 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 MUC1P15941 1255 aaPredicted RBP15.99■□□□□ 0.15
CD55-209ENST00000488171 GNALP38405 381 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 MICBQ29980 383 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 SLC35D3Q5M8T2 416 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 DUX4L9Q6RFH8 374 aaPredicted RBP15.99■□□□□ 0.15
CD55-209ENST00000488171 FGFRL1Q8N441 504 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 GALNT4Q8N4A0 578 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 SEH1LQ96EE3 360 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 SLC25A19Q9HC21 320 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 DUX4Q9UBX2 424 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 POMPQ9Y244 141 aa15.99■□□□□ 0.15
CD55-209ENST00000488171 CENPVL3A0A0U1RRI6 287 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 DYNC1I1O14576 645 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 CDIPTO14735 213 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 ALOX5APP20292 161 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 HCCSP53701 268 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 PSMA6P60900 246 aaKnown RBP15.98■□□□□ 0.15
CD55-209ENST00000488171 C11orf91Q3C1V1 193 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 C16orf87Q6PH81 154 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 SHISA2Q6UWI4 295 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 OR8B12Q8NGG6 310 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 CCL13Q99616 98 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 FGF23Q9GZV9 251 aaPredicted RBP15.98■□□□□ 0.15
CD55-209ENST00000488171 YY1AP1Q9H869 796 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 UNKLQ9H9P5 680 aaKnown RBP15.98■□□□□ 0.15
CD55-209ENST00000488171 LRP12Q9Y561 859 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 MPC1Q9Y5U8 109 aa15.98■□□□□ 0.15
CD55-209ENST00000488171 ZNF850A8MQ14 1090 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 SRRM5B3KS81 715 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 ECDO95905 644 aaPredicted RBP15.97■□□□□ 0.15
CD55-209ENST00000488171 CST4P01036 141 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 RPS7P62081 194 aaKnown RBP15.97■□□□□ 0.15
CD55-209ENST00000488171 IL13RA1P78552 427 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 IL5RAQ01344 420 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 PRDX4Q13162 271 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 APOFQ13790 326 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 SNCBQ16143 134 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 WDR38Q5JTN6 314 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 METTL11BQ5VVY1 283 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 Q6YL49 198 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 FTMTQ8N4E7 242 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 BCAS4Q8TDM0 211 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 OR5P3Q8WZ94 311 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 ST8SIA4Q92187 359 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 ZDHHC16Q969W1 377 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 MICU1Q9BPX6 476 aa15.97■□□□□ 0.15
CD55-209ENST00000488171 RTL8AQ9BWD3 113 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms