RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 HTR1DP28221 377 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 HMOX2P30519 316 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 PFN2P35080 140 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 FABP6P51161 128 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 UBE2E1P51965 193 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 LRRC74AQ0VAA2 488 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 CUL2Q13617 745 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 IDI1Q13907 227 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 FAM53BQ14153 422 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 ITIH4Q14624 930 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 LUZP6Q538Z0 58 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 SPANXN2Q5MJ10 180 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 STUMQ69YW2 141 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 TTC19Q6DKK2 380 aaPredicted RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 TMEM53Q6P2H8 277 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 OPN5Q6U736 354 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 METAP1DQ6UB28 335 aaPredicted RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 CD300LGQ6UXG3 332 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 CASP12Q6UXS9 341 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 RTL4Q6ZR62 310 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 TMEM136Q6ZRR5 245 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 BZW1Q7L1Q6 419 aaKnown RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 EIF3MQ7L2H7 374 aaKnown RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 LINC00469Q8N7U9 141 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 DRAXINQ8NBI3 349 aaPredicted RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 C19orf18Q8NEA5 215 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 C1orf64Q8NEQ6 169 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 OR51F2Q8NH61 342 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 RAB1CQ92928 201 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 RERGQ96A58 199 aaPredicted RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 SGTBQ96EQ0 304 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 CFAP53Q96M91 514 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 GPR82Q96P67 336 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 OR4K3Q96R72 315 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 PAIP2Q9BPZ3 127 aaKnown RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 CHCHD7Q9BUK0 85 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 PIGUQ9H490 435 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 LINC00574Q9H8X3 128 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 C20orf96Q9NUD7 363 aaPredicted RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 RBFOX1Q9NWB1 397 aaKnown RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 RAB20Q9NX57 234 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 CHMP5Q9NZZ3 219 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 CLN8Q9UBY8 286 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 V9GYY5 206 aaPredicted RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 LOXHD1Q8IVV2 1947 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 NCOA3Q9Y6Q9 1424 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 SIGLEC1Q9BZZ2 1709 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 ZBED9Q6R2W3 1325 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 THADAQ6YHU6 1953 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 A0A0A6YYD5 115 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 A0A1B0GUH1 482 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 ANKRD65E5RJM6 399 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 M0QX08 132 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 M0R1X1 148 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 MANBAO00462 879 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 MFNGO00587 321 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 ERI3O43414 337 aaKnown RBP0.98□□□□□ -2.25
SMC4-220ENST00000488017 CHMP2AO43633 222 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 CACNG3O60359 315 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 RAD1O60671 282 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 FCN3O75636 299 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 TRBV12-3P01733 135 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 IFNW1P05000 195 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 KRT16P08779 473 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 MYL9P24844 172 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 PPICP45877 212 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 RPS11P62280 158 aaKnown RBP eCLIP0.98□□□□□ -2.25
SMC4-220ENST00000488017 IRF8Q02556 426 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 GBE1Q04446 702 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 PRKCDQ05655 676 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 BAMBIQ13145 260 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 MED27Q6P2C8 311 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 PRSS54Q6PEW0 395 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 DEGS2Q6QHC5 323 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 TBPL2Q6SJ96 375 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 C16orf47Q6ZP98 133 aaPredicted RBP0.98□□□□□ -2.25
SMC4-220ENST00000488017 SSX9Q7RTT3 188 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 ERO1BQ86YB8 467 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 OFCC1Q8IZS5 231 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 VKORC1L1Q8N0U8 176 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 ZNF664Q8N3J9 261 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 JAGN1Q8N5M9 183 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 DRAM1Q8N682 238 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 UBAC2Q8NBM4 344 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 OR1L1Q8NH94 360 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 PHOSPHO2Q8TCD6 241 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 KLF14Q8TD94 323 aaPredicted RBP0.98□□□□□ -2.25
SMC4-220ENST00000488017 ANKRD7Q92527 254 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 C8orf76Q96K31 380 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 C11orf70Q9BRQ4 267 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 IQCGQ9H095 443 aaKnown RBP0.98□□□□□ -2.25
SMC4-220ENST00000488017 CSNK1G1Q9HCP0 422 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 DYRK4Q9NR20 520 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 TAS2R5Q9NYW4 299 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 CAB39Q9Y376 341 aaPredicted RBP0.98□□□□□ -2.25
SMC4-220ENST00000488017 LRRC42Q9Y546 428 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 NACADO15069 1562 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 THOC2Q8NI27 1593 aaKnown RBP0.98□□□□□ -2.25
SMC4-220ENST00000488017 MYO16Q9Y6X6 1858 aa0.98□□□□□ -2.25
SMC4-220ENST00000488017 AKAP11Q9UKA4 1901 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms