RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 OR6K3Q8NGY3 331 aa10.5□□□□□ -0.73
TRA2B-214ENST00000487615 FAM173AQ9BQD7 235 aa10.5□□□□□ -0.73
TRA2B-214ENST00000487615 AGPAT2O15120 278 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 SULT1A3P0DMM9 295 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 SULT1A4P0DMN0 295 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 CPN1P15169 458 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 HIST1H1DP16402 221 aaKnown RBP10.49□□□□□ -0.73
TRA2B-214ENST00000487615 IL11P20809 199 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 RAC3P60763 192 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 LSM6P62312 80 aaKnown RBP10.49□□□□□ -0.73
TRA2B-214ENST00000487615 SRPXP78539 464 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 ZDHHC22Q8N966 263 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 AIFM2Q9BRQ8 373 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 IGLV1-36A0A0B4J1U3 117 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 TEX51A0A1B0GUA7 166 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 ARGFXA6NJG6 315 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 PHLDA2Q53GA4 152 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 PPP1R1CQ8WVI7 109 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 FBXO4Q9UKT5 387 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 CSAG2Q9Y5P2 127 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 PTGFRP43088 359 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 BAMBIQ13145 260 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 DHRS2Q13268 280 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 OR11H7Q8NGC8 314 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 ST8SIA4Q92187 359 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 ZNF285Q96NJ3 590 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 OCSTAMPQ9BR26 566 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 EDEM2Q9BV94 578 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 HRH4Q9H3N8 390 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 TMEM9BQ9NQ34 198 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.49□□□□□ -0.735e-8■■■■■ 31
TRA2B-214ENST00000487615 TCFL5Q9UL49 500 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 SDK2Q58EX2 2172 aa10.49□□□□□ -0.73
TRA2B-214ENST00000487615 C5orf49A4QMS7 147 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 OR5H15A6NDH6 313 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 PHF1O43189 567 aaPredicted RBP10.48□□□□□ -0.73
TRA2B-214ENST00000487615 ANGPTL7O43827 346 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 ATG12O94817 140 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 LYPD3O95274 346 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 PPIAP62937 165 aaKnown RBP10.48□□□□□ -0.73
TRA2B-214ENST00000487615 EIF3IQ13347 325 aaKnown RBP10.48□□□□□ -0.73
TRA2B-214ENST00000487615 TMEM128Q5BJH2 165 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 ZNF362Q5T0B9 420 aaPredicted RBP10.48□□□□□ -0.73
TRA2B-214ENST00000487615 TMEM200AQ86VY9 491 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 LGI3Q8N145 548 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 BATF2Q8N1L9 274 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 OR10D3Q8NH80 312 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 SAP25Q8TEE9 199 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 RNF141Q8WVD5 230 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 A0A1B0GV50 99 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 A0A1W2PQM1 296 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 C17orf51A8MQB3 221 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 OR5H8P0DN80 308 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 CD96P40200 585 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 CCL11P51671 97 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 EFNB2P52799 333 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 GAS1P54826 345 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 ZNF709Q8N972 641 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 OR11G2Q8NGC1 345 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 PPP1R35Q8TAP8 253 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 ARHGAP5-AS1Q96IT6 56 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 MFRPQ9BY79 579 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 DEFB127Q9H1M4 99 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 ZNF816-ZNF321PA0A0X1KG74 233 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 ARR3P36575 388 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 CAMK2BQ13554 666 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 B3GNTL1Q67FW5 361 aaPredicted RBP10.48□□□□□ -0.73
TRA2B-214ENST00000487615 STX12Q86Y82 276 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 SLC25A38Q96DW6 304 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 SPACA1Q9HBV2 294 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 SDHAF2Q9NX18 166 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 EDARQ9UNE0 448 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 ZNF32P17041 273 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 OR3A4PP47883 348 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 SIGLEC14Q08ET2 396 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 ZNF169Q14929 603 aaPredicted RBP10.48□□□□□ -0.73
TRA2B-214ENST00000487615 SLC22A25Q6T423 547 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 CHAC2Q8WUX2 184 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 GHITMQ9H3K2 345 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 MRPL22Q9NWU5 206 aaKnown RBP10.48□□□□□ -0.73
TRA2B-214ENST00000487615 OR14J1Q9UGF5 321 aa10.48□□□□□ -0.73
TRA2B-214ENST00000487615 COL4A4P53420 1690 aaPredicted RBP10.48□□□□□ -0.73
TRA2B-214ENST00000487615 KIR2DS1A0A191URI9 304 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 RFPL4AA6NLU0 287 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 RFPL4AL1F8VTS6 287 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 NUPL2O15504 423 aaKnown RBP10.47□□□□□ -0.73
TRA2B-214ENST00000487615 MED6O75586 246 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 KIR2DS4P43632 304 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 SELENOPP49908 381 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 KIR2DS1Q14954 304 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 OR1C1Q15619 314 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 TBC1D28Q2M2D7 210 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 AKR1C8PQ5T2L2 129 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 TFAP2EQ6VUC0 442 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 SLC25A26Q70HW3 274 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 ZNF519Q8TB69 540 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 ZNF391Q9UJN7 358 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 TRAPPC2LQ9UL33 140 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 ST3GAL6Q9Y274 331 aa10.47□□□□□ -0.73
TRA2B-214ENST00000487615 DOCK8Q8NF50 2099 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms