RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 RHBDD3Q9Y3P4 386 aa10.07□□□□□ -0.8
VPS16-208ENST00000487461 SAMHD1Q9Y3Z3 626 aaKnown RBP10.07□□□□□ -0.8
VPS16-208ENST00000487461 A0A0U1RQK1 487 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 hCG_38984A0A1B0GV85 526 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 RIIAD1A6NNX1 92 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.06□□□□□ -0.8
VPS16-208ENST00000487461 DCTN3O75935 186 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 MUC1P15941 1255 aaPredicted RBP10.06□□□□□ -0.8
VPS16-208ENST00000487461 ZNF3P17036 446 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 AMY2BP19961 511 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 HSD11B1P28845 292 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 GSTT1P30711 240 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 GRK5P34947 590 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 ZNF121P58317 390 aaPredicted RBP10.06□□□□□ -0.8
VPS16-208ENST00000487461 KRTAP10-3P60369 221 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 MICBQ29980 383 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 C11orf91Q3C1V1 193 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 OLFML2AQ68BL7 652 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 LCN8Q6JVE9 175 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 WDR82Q6UXN9 313 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 CD300LDQ6UXZ3 194 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 DHFR2Q86XF0 187 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 ERI1Q8IV48 349 aaKnown RBP10.06□□□□□ -0.8
VPS16-208ENST00000487461 IQCF1Q8N6M8 205 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 OR6N2Q8NGY6 317 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 TBC1D15Q8TC07 691 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 SSMEM1Q8WWF3 244 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 WFDC12Q8WWY7 111 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 OTULINQ96BN8 352 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 NSL1Q96IY1 281 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 INTS14Q96SY0 518 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 REEP1Q9H902 201 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 SP140LQ9H930 580 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 BRD7Q9NPI1 651 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 CMC2Q9NRP2 79 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 PDP1Q9P0J1 537 aaPredicted RBP10.06□□□□□ -0.8
VPS16-208ENST00000487461 POMT1Q9Y6A1 747 aa10.06□□□□□ -0.8
VPS16-208ENST00000487461 CLPSL1A2RUU4 121 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 CDIPTO14735 213 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 GLCEO94923 617 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 IGHV4-59P01825 116 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 APOC1P02654 83 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 OPRL1P41146 370 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 IER3P46695 156 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 MNAT1P51948 309 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 DEFA6Q01524 100 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 TRIM25Q14258 630 aaKnown RBP10.05□□□□□ -0.8
VPS16-208ENST00000487461 CDONQ4KMG0 1287 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 FAM98BQ52LJ0 330 aaKnown RBP10.05□□□□□ -0.8
VPS16-208ENST00000487461 WDR38Q5JTN6 314 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 C17orf107Q6ZR85 190 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 VMO1Q7Z5L0 202 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 TIGD4Q8IY51 512 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 LY6G5BQ8NDX9 201 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 OR10G2Q8NGC3 310 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 OR5T2Q8NGG2 359 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 OR52H1Q8NGJ2 320 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 FEVQ99581 238 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 TLNRD1Q9H1K6 362 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 OR10A2Q9H208 303 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 OR51V1Q9H2C8 321 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 KPTNQ9Y664 436 aa10.05□□□□□ -0.8
VPS16-208ENST00000487461 WNK1Q9H4A3 2382 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 ACOT8O14734 319 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 GPR137BO60478 399 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 TIPRLO75663 272 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 CFL1P23528 166 aaKnown RBP10.04□□□□□ -0.8
VPS16-208ENST00000487461 NAA10P41227 235 aaPredicted RBP10.04□□□□□ -0.8
VPS16-208ENST00000487461 TGM4P49221 684 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 PRB3Q04118 309 aaPredicted RBP10.04□□□□□ -0.8
VPS16-208ENST00000487461 GFOD2Q3B7J2 385 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 ATPAF1Q5TC12 328 aaPredicted RBP10.04□□□□□ -0.8
VPS16-208ENST00000487461 RHOUQ7L0Q8 258 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 SHFQ7M4L6 423 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 LDLRAD3Q86YD5 345 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 ARHGAP24Q8N264 748 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 GALNT4Q8N4A0 578 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 FAM216BQ8N7L0 139 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 SCCPDHQ8NBX0 429 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 CSNK2A3Q8NEV1 391 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 TEX47Q8TBZ9 253 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 GIPC3Q8TF64 312 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 DYRK2Q92630 601 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 RPL3LQ92901 407 aaKnown RBP10.04□□□□□ -0.8
VPS16-208ENST00000487461 ITPKCQ96DU7 683 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 PGAM5Q96HS1 289 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 CITED1Q99966 193 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 PAPOLGQ9BWT3 736 aaKnown RBP10.04□□□□□ -0.8
VPS16-208ENST00000487461 FGF23Q9GZV9 251 aaPredicted RBP10.04□□□□□ -0.8
VPS16-208ENST00000487461 MUC13Q9H3R2 512 aa10.04□□□□□ -0.8
VPS16-208ENST00000487461 ZNF850A8MQ14 1090 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 H3BN98 237 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 NDUFB3O43676 98 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 SELENOFO60613 162 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 TFF1P04155 84 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 H2BFMP0C1H6 154 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 T-ENOLP0DO92 83 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 RAP2AP10114 183 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 ACKR3P25106 362 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms