RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 FANCEQ9HB96 536 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 GPATCH2LQ9NWQ4 482 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 PDP1Q9P0J1 537 aaPredicted RBP3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 TBC1D24Q9ULP9 559 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 MRPS18BQ9Y676 258 aaKnown RBP3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 GOLGA4Q13439 2230 aaKnown RBP3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 PTPRQQ9UMZ3 2332 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 PRRC2AP48634 2157 aaKnown RBP3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 BOD1L1Q8NFC6 3051 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 C11orf94C9JXX5 98 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 TRAPPC3O43617 180 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 GNAO1P09471 354 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 CPN2P22792 545 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 GTF2E2P29084 291 aaKnown RBP3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 CCT6AP40227 531 aaKnown RBP3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 NAMPTP43490 491 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 CX3CR1P49238 355 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 RAB9AP51151 201 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF136P52737 540 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 PSMC5P62195 406 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 SLC7A9P82251 487 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 LIPEQ05469 1076 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 PRPSAP1Q14558 356 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 CCNJQ5T5M9 372 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 LYPD2Q6UXB3 125 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 CD300LGQ6UXG3 332 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 ANGPTL8Q6UXH0 198 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 STPG2Q8N412 459 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 COMMD1Q8N668 190 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 PQLC3Q8N755 202 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 CD300LFQ8TDQ1 290 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 ISG20Q96AZ6 181 aaKnown RBP3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 CYYR1Q96J86 154 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 CEP170P1Q96L14 293 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 MRPL37Q9BZE1 423 aaKnown RBP3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 PRORYQ9H606 182 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 HRASLS2Q9NWW9 162 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 WSB1Q9Y6I7 421 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 USP9XQ93008 2570 aaPredicted RBP3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 DOPEY2Q9Y3R5 2298 aa3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 NYNRINQ9P2P1 1898 aaKnown RBP3.22□□□□□ -1.89
PRPF38A-203ENST00000487160 ASXL3Q9C0F0 2248 aa3.21□□□□□ -1.89
PRPF38A-203ENST00000487160 FLNCQ14315 2725 aa3.21□□□□□ -1.89
PRPF38A-203ENST00000487160 SCN1AP35498 2009 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 TMX2-CTNND1H3BSU7 103 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 TEX46H3BTG2 121 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 CHST1O43916 411 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 SRP72O76094 671 aaKnown RBP3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 TDP2O95551 362 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 OR4Q2P0C623 313 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 ACSM4P0C7M7 580 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 ZDHHC11BP0C7U3 371 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 MYL2P10916 166 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 RALBP11234 206 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 DCKP27707 260 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 GABRR2P28476 465 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 P2RY2P41231 377 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 MXD1Q05195 221 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 HIKESHIQ53FT3 197 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 ANKRD22Q5VYY1 191 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 TMEM53Q6P2H8 277 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 OTUD6AQ7L8S5 288 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 OAFQ86UD1 273 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 DEFB119Q8N690 84 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 CAPSLQ8WWF8 208 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 LXNQ9BS40 222 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 CYP3A43Q9HB55 503 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 C6orf50Q9HD87 102 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 XPNPEP1Q9NQW7 623 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 RBAKQ9NYW8 714 aaPredicted RBP3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 AHSPQ9NZD4 102 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 ZNF629Q9UEG4 869 aaPredicted RBP3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 LGALS13Q9UHV8 139 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 CCL26Q9Y258 94 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 ST3GAL6Q9Y274 331 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 NBPF19A0A087WUL8 3843 aa3.21□□□□□ -1.9
PRPF38A-203ENST00000487160 MYO9AB2RTY4 2548 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 SUPT3HB4E1H0 165 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 NDUFAB1O14561 156 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 EIF4E2O60573 245 aaKnown RBP3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 HUS1O60921 280 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 ERCC1P07992 297 aaPredicted RBP3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 ADRB3P13945 408 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 MAS1LP35410 378 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 ARL2P36404 184 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 UQCRFS1P47985 274 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 ZNF33AQ06730 810 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 DOC2AQ14183 400 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 ITIH4Q14624 930 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 TEX43Q6ZNM6 134 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 ABHD13Q7L211 337 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 CMTM8Q8IZV2 173 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 GABRG1Q8N1C3 465 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 MARCH1Q8TCQ1 289 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 GLYATL2Q8WU03 294 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 SRSF12Q8WXF0 261 aaKnown RBP3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 ECHDC3Q96DC8 303 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 PRRC1Q96M27 445 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 WFIKKN1Q96NZ8 548 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms