RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CMC1Q7Z7K0 106 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 TDRPQ86YL5 185 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 MUC15Q8N387 334 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 OR9A2Q8NGT5 310 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 OR4A16Q8NH70 328 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 SGMS2Q8NHU3 365 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 WIPF2Q8TF74 440 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-209ENST00000486618 PINX1Q96BK5 328 aaKnown RBP5.87□□□□□ -1.47
HDAC3-209ENST00000486618 R3HDM4Q96D70 268 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 ADGRG7Q96K78 797 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 FAM210BQ96KR6 192 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 HBEGFQ99075 208 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 ATG101Q9BSB4 218 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 KLHL13Q9P2N7 655 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 FOXJ3Q9UPW0 622 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 PSG11Q9UQ72 335 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 COA3Q9Y2R0 106 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-209ENST00000486618 PPIAL4EA0A075B759 164 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 A0A0J9YW62 118 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 TEX13DA0A0J9YY54 714 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-209ENST00000486618 TCRBV9S1A1TA0A576 114 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 FAM159BA6NKW6 160 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 DUXAA6NLW8 204 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 GJE1A6NN92 205 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 E7EQL1 145 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 OR7A17O14581 309 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 TPST2O60704 377 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 ENTPD5O75356 428 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 ADAP1O75689 374 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 NKX2-2O95096 273 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 UTS2O95399 124 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 SERPINA1P01009 418 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 SERPINE2P07093 398 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 PPIAL4FP0DN26 164 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 GGT1P19440 569 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 RAB3AP20336 220 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 TAC1P20366 129 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 AZGP1P25311 298 aaKnown RBP5.86□□□□□ -1.47
HDAC3-209ENST00000486618 SRP14P37108 136 aaKnown RBP5.86□□□□□ -1.47
HDAC3-209ENST00000486618 RFX3P48380 749 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 PDLIM4P50479 330 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 FABP6P51161 128 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 HERV-K104P63124 156 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 MYBPC1Q00872 1141 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 DEFA6Q01524 100 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 PLP2Q04941 152 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 SLC34A1Q06495 639 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 HSPB3Q12988 150 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 BAMBIQ13145 260 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 GGTLC2Q14390 218 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 PTGR1Q14914 329 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 ZNF239Q16600 458 aaKnown RBP5.86□□□□□ -1.47
HDAC3-209ENST00000486618 CR1LQ2VPA4 569 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 FAM174BQ3ZCQ3 159 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 GGTA1PQ4G0N0 100 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 LRIF1Q5T3J3 769 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 C11orf71Q6IPW1 123 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 KCNIP4Q6PIL6 250 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 SLC16A12Q6ZSM3 486 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 Q6ZT83 130 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 FCRLAQ7L513 359 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 DOK3Q7L591 496 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 SLC16A9Q7RTY1 509 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 NUFIP2Q7Z417 695 aaKnown RBP5.86□□□□□ -1.47
HDAC3-209ENST00000486618 ZDHHC23Q8IYP9 409 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 RNF113BQ8IZP6 322 aaKnown RBP5.86□□□□□ -1.47
HDAC3-209ENST00000486618 PQLC1Q8N2U9 271 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 Q8N402 240 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 MMGT1Q8N4V1 131 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 OR7G2Q8NG99 324 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 MRAPQ8TCY5 172 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 RNF128Q8TEB7 428 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 ABHD3Q8WU67 409 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 PIGCQ92535 297 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 CDS1Q92903 461 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 LHX4Q969G2 390 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 EXOSC8Q96B26 276 aaKnown RBP5.86□□□□□ -1.47
HDAC3-209ENST00000486618 COQ8BQ96D53 544 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 MSI2Q96DH6 328 aaKnown RBP5.86□□□□□ -1.47
HDAC3-209ENST00000486618 TCEAL7Q9BRU2 100 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 C2orf88Q9BSF0 95 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 ZNF426Q9BUY5 554 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 OR51M1Q9H341 326 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 KCNK15Q9H427 330 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 EML4Q9HC35 981 aaKnown RBP5.86□□□□□ -1.47
HDAC3-209ENST00000486618 NANSQ9NR45 359 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 SDHAF2Q9NX18 166 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 VNN3Q9NY84 501 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 FLRT3Q9NZU0 649 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 VPS29Q9UBQ0 182 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 SMPXQ9UHP9 88 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 FBXL3Q9UKT7 428 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 PPIAL4AQ9Y536 164 aa5.86□□□□□ -1.47
HDAC3-209ENST00000486618 TSSC4Q9Y5U2 329 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-209ENST00000486618 PRSS29PA6NIE9 313 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 ZNF814B7Z6K7 855 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 H3BNH8 94 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 hCG_2039718K7EN88 272 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 XRCC2O43543 280 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 LYZL6O75951 148 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms