RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 MT-ND5P03915 603 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 MSMBP08118 114 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 COL8A2P25067 703 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 TMEM33P57088 247 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 KLF3P57682 345 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-226ENST00000486210 ACTA2P62736 377 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 ACTG2P63267 376 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 MRPS11P82912 194 aaKnown RBP14.91□□□□□ -0.02
MCF2L-226ENST00000486210 IRF3Q14653 427 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 HLXQ14774 488 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-226ENST00000486210 MOGQ16653 247 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 ZNF829Q3KNS6 432 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-226ENST00000486210 USP43Q70EL4 1123 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 FAM220AQ7Z4H9 259 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 SYS1Q8N2H4 156 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 KLHL36Q8N4N3 616 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 PGAM5Q96HS1 289 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 PBOV1Q9GZY1 135 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 TAAR3PQ9P1P4 343 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 MYEF2Q9P2K5 600 aaKnown RBP14.91□□□□□ -0.02
MCF2L-226ENST00000486210 SLC22A13Q9Y226 551 aa14.91□□□□□ -0.02
MCF2L-226ENST00000486210 CAB39Q9Y376 341 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-226ENST00000486210 LOC110117498-PIK3R3F6TDL0 507 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 TRIM77I1YAP6 450 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 RGS10O43665 173 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 AVPP01185 164 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 NAT2P11245 290 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 MMP16P51512 607 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 ZNF92Q03936 586 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 PCGF3Q3KNV8 242 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 ALKBH6Q3KRA9 238 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 KCTD20Q7Z5Y7 419 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 CATSPERDQ86XM0 798 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 PRSS35Q8N3Z0 413 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 NANOGP1Q8N7R0 232 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 ZNF485Q8NCK3 441 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 SYNPRQ8TBG9 265 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 KLF14Q8TD94 323 aaPredicted RBP14.9□□□□□ -0.02
MCF2L-226ENST00000486210 GATAD2BQ8WXI9 593 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 SGK3Q96BR1 496 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 CMBLQ96DG6 245 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 MRPL48Q96GC5 212 aaKnown RBP14.9□□□□□ -0.02
MCF2L-226ENST00000486210 LYZL4Q96KX0 146 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 CDCA4Q9BXL8 241 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 YTHDF1Q9BYJ9 559 aaKnown RBP14.9□□□□□ -0.02
MCF2L-226ENST00000486210 ZNF275Q9NSD4 429 aaPredicted RBP14.9□□□□□ -0.02
MCF2L-226ENST00000486210 CHCHD3Q9NX63 227 aaKnown RBP14.9□□□□□ -0.02
MCF2L-226ENST00000486210 OR52A1Q9UKL2 312 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 GTF2A1LQ9UNN4 478 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 LRCH1Q9Y2L9 728 aa14.9□□□□□ -0.02
MCF2L-226ENST00000486210 J3QW42 95 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 TPD52L2O43399 206 aaKnown RBP14.89□□□□□ -0.03
MCF2L-226ENST00000486210 LALBAP00709 142 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 ZNF250P15622 560 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 EEF1B2P24534 225 aaKnown RBP14.89□□□□□ -0.03
MCF2L-226ENST00000486210 KIR3DL2P43630 455 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 GTF2A1P52655 376 aaPredicted RBP14.89□□□□□ -0.03
MCF2L-226ENST00000486210 NANOS3P60323 173 aaKnown RBP14.89□□□□□ -0.03
MCF2L-226ENST00000486210 GK2Q14410 553 aaPredicted RBP14.89□□□□□ -0.03
MCF2L-226ENST00000486210 GFOD2Q3B7J2 385 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 ZNF718Q3SXZ3 478 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 AWAT1Q58HT5 328 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 WDR38Q5JTN6 314 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 PRR31Q5SQ13 230 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 RNLSQ5VYX0 342 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 MBNL2Q5VZF2 373 aaKnown RBP14.89□□□□□ -0.03
MCF2L-226ENST00000486210 XAF1Q6GPH4 301 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 UNQ6126/PRO20091Q6UXV3 157 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 TEX29Q8N6K0 151 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 OR5L1Q8NGL2 311 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 OR52N1Q8NH53 320 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 OR51F2Q8NH61 342 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 YIPF5Q969M3 257 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 CCDC90BQ9GZT6 254 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 OR10A2Q9H208 303 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 TREM2Q9NZC2 230 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 BLOC1S6Q9UL45 172 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 SNX5Q9Y5X3 404 aa14.89□□□□□ -0.03
MCF2L-226ENST00000486210 ACOD1A6NK06 481 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 C17orf100A8MU93 164 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 TTRP02766 147 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 EPHA1P21709 976 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 MAP2K4P45985 399 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 GABARAPL2P60520 117 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 LMO4P61968 165 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 PSG7Q13046 419 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 FBXW12Q6X9E4 464 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 TMPRSS11AQ6ZMR5 421 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 PRSS48Q7RTY5 328 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 KLBQ86Z14 1044 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 OR2G2Q8NGZ5 317 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 SPSB4Q96A44 273 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 REEP6Q96HR9 211 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 COG8Q96MW5 612 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 SP140LQ9H930 580 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 ESM1Q9NQ30 184 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 FRRS1LQ9P0K9 344 aa14.88□□□□□ -0.03
MCF2L-226ENST00000486210 NUFIP1Q9UHK0 495 aaKnown RBP14.88□□□□□ -0.03
MCF2L-226ENST00000486210 SIRT4Q9Y6E7 314 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-226ENST00000486210 IGLV3-9A0A075B6K5 115 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms