RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ZNF707Q96C28 371 aaPredicted RBP1.47□□□□□ -2.17
GCFC2-209ENST00000486016 KCNS1Q96KK3 526 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 C18orf15Q96N68 181 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 SCGB3A2Q96PL1 93 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 CSPG4P5Q96PW8 444 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 AGMATQ9BSE5 352 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 NAA50Q9GZZ1 169 aaKnown RBP1.47□□□□□ -2.17
GCFC2-209ENST00000486016 TOLLIPQ9H0E2 274 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 OR2AG1Q9H205 316 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 BLZF1Q9H2G9 400 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 RHBDL2Q9NX52 303 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 ZNF586Q9NXT0 402 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 PEF1Q9UBV8 284 aaKnown RBP1.47□□□□□ -2.17
GCFC2-209ENST00000486016 SIGLEC9Q9Y336 463 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 HES2Q9Y543 173 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 PLEKHG2Q9H7P9 1386 aa1.47□□□□□ -2.17
GCFC2-209ENST00000486016 SLC22A20A6NK97 555 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 K7EM74 188 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 CHMP2AO43633 222 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 CTNSO60931 367 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 HSBP1O75506 76 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 TGM6O95932 706 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 MT-ND4P03905 459 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 CATP04040 527 aaKnown RBP1.46□□□□□ -2.18
GCFC2-209ENST00000486016 PRLHRP49683 370 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 DAOAP59103 153 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 DOC2AQ14183 400 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 TSC22D1Q15714 1073 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 SLC25A35Q3KQZ1 300 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 YIF1BQ5BJH7 314 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 OR2T5Q6IEZ7 315 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 OPN5Q6U736 354 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 CD300LGQ6UXG3 332 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 UNQ9165/PRO28630Q6UXU0 137 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 LINC00336Q6ZUF6 198 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 MRPL21Q7Z2W9 205 aaKnown RBP1.46□□□□□ -2.18
GCFC2-209ENST00000486016 MDP1Q86V88 176 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 RAB43Q86YS6 212 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 OR5T1Q8NG75 326 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 OR2T29Q8NH02 315 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 RXFP4Q8TDU9 374 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 ASZ1Q8WWH4 475 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 RTN4IP1Q8WWV3 396 aaPredicted RBP1.46□□□□□ -2.18
GCFC2-209ENST00000486016 NAT6Q93015 286 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 RERGQ96A58 199 aaPredicted RBP1.46□□□□□ -2.18
GCFC2-209ENST00000486016 CERS2Q96G23 380 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 TEAD3Q99594 435 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 KCNS3Q9BQ31 491 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 SULT4A1Q9BR01 284 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 ZNF717Q9BY31 904 aaPredicted RBP1.46□□□□□ -2.18
GCFC2-209ENST00000486016 RPRD1BQ9NQG5 326 aaKnown RBP1.46□□□□□ -2.18
GCFC2-209ENST00000486016 CHRAC1Q9NRG0 131 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 RBFOX1Q9NWB1 397 aaKnown RBP1.46□□□□□ -2.18
GCFC2-209ENST00000486016 C21orf62Q9NYP8 219 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 ZNF257Q9Y2Q1 563 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 CBY1Q9Y3M2 126 aa1.46□□□□□ -2.18
GCFC2-209ENST00000486016 IGHV3-49A0A0A0MS15 119 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 A0A1B0GUH1 482 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 LGALS9O00182 355 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 PLIN3O60664 434 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 CDRT1O95170 752 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 CYB5R3P00387 301 aaPredicted RBP1.45□□□□□ -2.18
GCFC2-209ENST00000486016 IGLV2-8P01709 118 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 THRAP10827 490 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 GFAPP14136 432 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 PMCHP20382 165 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 GABRR2P28476 465 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 PEX19P40855 299 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 OR1G1P47890 313 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 BCAP31P51572 246 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 UBE2E1P51965 193 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 OR2B8PP59922 312 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 YWHAEP62258 255 aaKnown RBP1.45□□□□□ -2.18
GCFC2-209ENST00000486016 LCN2P80188 198 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 IFITM3Q01628 133 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 OR1Q1Q15612 314 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 TPRG1LQ5T0D9 272 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 GUSBP11Q6P575 273 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 TMPRSS11AQ6ZMR5 421 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 ZNF101Q8IZC7 436 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 DRAM1Q8N682 238 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 LRRC52Q8N7C0 313 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 TMEM105Q8N8V8 129 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 SPANXA2-OT1Q8N9U9 137 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 PIH1D2Q8WWB5 315 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 CDS1Q92903 461 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 CPNE4Q96A23 557 aaPredicted RBP1.45□□□□□ -2.18
GCFC2-209ENST00000486016 RCN3Q96D15 328 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 UBE2E2Q96LR5 201 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 OR4K3Q96R72 315 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 CHCHD7Q9BUK0 85 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 IL22Q9GZX6 179 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 RGCCQ9H4X1 137 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 REEP1Q9H902 201 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 CYP3A43Q9HB55 503 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 FBXO8Q9NRD0 319 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 TREX1Q9NSU2 369 aa1.45□□□□□ -2.18
GCFC2-209ENST00000486016 FARSAQ9Y285 508 aaKnown RBP1.45□□□□□ -2.18
GCFC2-209ENST00000486016 ANKRD12Q6UB98 2062 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 LTBP4Q8N2S1 1624 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms