RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 FSHBP01225 129 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 HLA-DQA2P01906 255 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 LCATP04180 440 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 SPARCP09486 303 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 EGR1P18146 543 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 TNFRSF1AP19438 455 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 CCL1P22362 96 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 HTR1FP30939 366 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 PSMB10P40306 273 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 NAA10P41227 235 aaPredicted RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 GPR6P46095 362 aaPredicted RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 SLC6A9P48067 706 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 PRKXP51817 358 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 DVL1P1P54792 670 aaPredicted RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 ZNF121P58317 390 aaPredicted RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 TNFAIP6P98066 277 aaPredicted RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 EGR3Q06889 387 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 SLC3A1Q07837 685 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 ZMYND11Q15326 602 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 TSTQ16762 297 aaKnown RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 HFEQ30201 348 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 DMRTC1Q5HYR2 192 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 TMEM42Q69YG0 159 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 PLEKHG7Q6ZR37 379 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 PGAP1Q75T13 922 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 SPATC1Q76KD6 591 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 ERI1Q8IV48 349 aaKnown RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 GID4Q8IVV7 300 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 LINC01356Q8N9X3 169 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 SPERTQ8NA61 448 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 OR10AD1Q8NGE0 317 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 OR6N2Q8NGY6 317 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 ITLN1Q8WWA0 313 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 HPSE2Q8WWQ2 592 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 ASB17Q8WXJ9 295 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 EME1Q96AY2 570 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 RCC1LQ96I51 464 aaKnown RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 ZNF582Q96NG8 517 aaPredicted RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 RDH12Q96NR8 316 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 OR2V2Q96R30 315 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 OR8B4Q96RC9 309 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 PRRG3Q9BZD7 231 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 EGLN1Q9GZT9 426 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 OR51V1Q9H2C8 321 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 SP140LQ9H930 580 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 TMEM106BQ9NUM4 274 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 TMEM100Q9NV29 134 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 CLN6Q9NWW5 311 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 PTTG3PQ9NZH4 202 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 WARS2Q9UGM6 360 aaKnown RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 NUFIP1Q9UHK0 495 aaKnown RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 MRM2Q9UI43 246 aaKnown RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 EXOGQ9Y2C4 368 aaKnown RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 POLR1DQ9Y2S0 133 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 SF3B6Q9Y3B4 125 aaKnown RBP4.79□□□□□ -1.64
CUX1-208ENST00000485792 LRP12Q9Y561 859 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 NPTNQ9Y639 398 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 TMEM14AQ9Y6G1 99 aa4.79□□□□□ -1.64
CUX1-208ENST00000485792 DHRS7CA6NNS2 312 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 CLDN25C9JDP6 229 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 F5H5P2 479 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 PSMD9O00233 223 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 PHYHO14832 338 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 PAX4O43316 350 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 LMX1BO60663 402 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 CDC14BO60729 498 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 WBP4O75554 376 aaKnown RBP4.78□□□□□ -1.64
CUX1-208ENST00000485792 SULT1C4O75897 302 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 ZNF205O95201 554 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 TTRP02766 147 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 HLA-DPB1P04440 258 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 MRPL3P09001 348 aaKnown RBP4.78□□□□□ -1.64
CUX1-208ENST00000485792 ACAA1P09110 424 aaPredicted RBP4.78□□□□□ -1.64
CUX1-208ENST00000485792 WNT2P09544 360 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 OR2T7P0C7T2 308 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 ATP6V1B1P15313 513 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 AMY2BP19961 511 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 CFL1P23528 166 aaKnown RBP4.78□□□□□ -1.64
CUX1-208ENST00000485792 CX3CR1P49238 355 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 ADARB1P78563 741 aaKnown RBP4.78□□□□□ -1.64
CUX1-208ENST00000485792 ZNF85Q03923 595 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 MALLQ13021 153 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 MPPED2Q15777 294 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 ZNF404Q494X3 552 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 AVPI1Q5T686 147 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 LCN1P1Q5VSP4 162 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 PRAMEF6Q5VXH4 476 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 MEDAGQ5VYS4 303 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 ASPHD2Q6ICH7 369 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 FAM166AQ6J272 317 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 KCTD18Q6PI47 426 aaPredicted RBP4.78□□□□□ -1.64
CUX1-208ENST00000485792 LRRN1Q6UXK5 716 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 ZNF841Q6ZN19 808 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 ZNF771Q7L3S4 317 aaPredicted RBP4.78□□□□□ -1.64
CUX1-208ENST00000485792 ELMOD2Q8IZ81 293 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 OR5AS1Q8N127 324 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 GALNT4Q8N4A0 578 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 CBR4Q8N4T8 237 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 PACRGLQ8N7B6 248 aa4.78□□□□□ -1.64
CUX1-208ENST00000485792 C19orf18Q8NEA5 215 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms