RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 ANKRD30BLA7E2S9 258 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 OGG1O15527 345 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 TPD52L2O43399 206 aaKnown RBP13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 SYT7O43581 403 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 CDC14BO60729 498 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 DHRS3O75911 302 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 ZFPL1O95159 310 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 ERCC1P07992 297 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 CD55P08174 381 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 UBCP0CG48 685 aaKnown RBP13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 DAOP14920 347 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 FAHP16930 419 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 COL8A2P25067 703 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 MAP2K4P45985 399 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 CDH15P55291 814 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 WNT4P56705 351 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 MRPL28Q13084 256 aaKnown RBP13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 CDK5R1Q15078 307 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 OR8G1Q15617 311 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 DMRTC1Q5HYR2 192 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 DOK3Q7L591 496 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 PRSS48Q7RTY5 328 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 CSNK2A3Q8NEV1 391 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 SEMA6DQ8NFY4 1073 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 OR51A4Q8NGJ6 313 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 RPS4Y2Q8TD47 263 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 UBASH3BQ8TF42 649 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 PIGCQ92535 297 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 OR2V2Q96R30 315 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 DIRC2Q96SL1 478 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 ADAT1Q9BUB4 502 aaKnown RBP13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 PAPOLGQ9BWT3 736 aaKnown RBP13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 FGF23Q9GZV9 251 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 BARX1Q9HBU1 254 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 DECR2Q9NUI1 292 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 TREM2Q9NZC2 230 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 BLOC1S6Q9UL45 172 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 PIGLQ9Y2B2 252 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 CACNG2Q9Y698 323 aa13.13□□□□□ -0.31
RPUSD3-217ENST00000485705 TRBV2A0A0J9YWF9 115 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 ZNF850A8MQ14 1090 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 MTRF1O75570 445 aaKnown RBP13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 CST4P01036 141 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 ISG15P05161 165 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 ATP6V1B1P15313 513 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 ACHEP22303 614 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 RIPPLY1Q0D2K3 151 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 MAB21L1Q13394 359 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 TESK1Q15569 626 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 TMEM244Q5VVB8 128 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 RPL22L1Q6P5R6 122 aaKnown RBP13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 DNM1P46Q6ZS02 220 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 ZNF676Q8N7Q3 588 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 WFDC11Q8NEX6 87 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 OR5AK2Q8NH90 309 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 MEGF10Q96KG7 1140 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 MND1Q9BWT6 205 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 SAP30LQ9HAJ7 183 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 TRIM36Q9NQ86 728 aa13.12□□□□□ -0.31
RPUSD3-217ENST00000485705 ZNF816-ZNF321PA0A0X1KG74 233 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 PNMA8CA0A1B0GUJ8 204 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 TNFSF4P23510 183 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 GABARAPL2P60520 117 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 SLC3A1Q07837 685 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 PRDX4Q13162 271 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 CARTPTQ16568 116 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 CLEC12BQ2HXU8 276 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 CCDC58Q4VC31 144 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 SHEQ5VZ18 495 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 DMKNQ6E0U4 476 aaPredicted RBP13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 PRSS57Q6UWY2 283 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 HAVCR2Q8TDQ0 301 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 RGP1Q92546 391 aaPredicted RBP13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 YTHDF1Q9BYJ9 559 aaKnown RBP13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 EGLN1Q9GZT9 426 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 SLC22A4Q9H015 551 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 DCAF16Q9NXF7 216 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 IL19Q9UHD0 177 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 HHLA2Q9UM44 414 aa13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 FLNAP21333 2647 aaKnown RBP13.11□□□□□ -0.31
RPUSD3-217ENST00000485705 IGHV1-69-2A0A0G2JMI3 117 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 LOC100289279A0A1B0GTE1 492 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 TMEM212A6NML5 194 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 GMDSO60547 372 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 RP2O75695 350 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 GNALP38405 381 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 SPHARQ15513 63 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 MED22Q15528 200 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 CEP78Q5JTW2 689 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 ZBTB37Q5TC79 503 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 PRAMEF6Q5VXH4 476 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 MOB3CQ70IA8 216 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 KRT74Q7RTS7 529 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 WDR86Q86TI4 376 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 OR13C5Q8NGS8 318 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 HPSE2Q8WWQ2 592 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 RDH5Q92781 318 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 ITPKCQ96DU7 683 aa13.1□□□□□ -0.31
RPUSD3-217ENST00000485705 SMIM19Q96E16 107 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms