RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 RIPPLY3P57055 190 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 ZP1P60852 638 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 PLA2G7Q13093 441 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 SLC16A12Q6ZSM3 486 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 P4HA3Q7Z4N8 544 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 CALHM1Q8IU99 346 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 CTAGE3PQ8IX95 158 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 OR52N2Q8NGI0 321 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 OR1B1Q8NGR6 318 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 C16orf78Q8WTQ4 265 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM37Q8WXS4 190 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 PTH2Q96A98 100 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 STACQ99469 402 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 NIPSNAP1Q9BPW8 284 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 NEURL2Q9BR09 285 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 SFXN3Q9BWM7 321 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 HES7Q9BYE0 225 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 UCK2Q9BZX2 261 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF665Q9H7R5 613 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 ZC4H2Q9NQZ6 224 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 NPAP1Q9NZP6 1156 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 SPRR3Q9UBC9 169 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 TESMINQ9Y4I5 508 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 SRRM4A7MD48 611 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 TCAPO15273 167 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 SGCEO43556 437 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ZG16O60844 167 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 NTN1O95631 604 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 CT45A8P0DMV1 189 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 CT45A9P0DMV2 189 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 MGMTP16455 207 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF708P17019 499 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF43P17038 809 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ADMP35318 185 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 CEACAM6P40199 344 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ZFP36L2P47974 494 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 MAGOHP61326 146 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 RANP62826 216 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 PRR5P85299 388 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ACSF3Q4G176 576 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 CT45A2Q5DJT8 189 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 NPSR1Q6W5P4 371 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 LYG2Q86SG7 212 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 MYPOPQ86VE0 399 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 OR5AU1Q8NGC0 362 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 OR52B6Q8NGF0 335 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 RNASE6Q93091 150 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 CNRIP1Q96F85 164 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 NSL1Q96IY1 281 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 COL21A1Q96P44 957 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 GPHA2Q96T91 129 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 NKX3-1Q99801 234 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 PIGUQ9H490 435 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ANKRD19PQ9H560 264 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 C5orf66Q9H5L9 145 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 C3orf14Q9HBI5 128 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 HINT3Q9NQE9 182 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ELOVL5Q9NYP7 299 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM216Q9P0N5 145 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 RNF6Q9Y252 685 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ETV7Q9Y603 341 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 A0A1B0GTH9 108 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 EFCAB10A6NFE3 127 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 FAAHO00519 579 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 LYPLA1O75608 230 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 FARS2O95363 451 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 APOC1P02654 83 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ABOP16442 354 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 FKBP2P26885 142 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF763Q0D2J5 394 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 TP53I3Q53FA7 332 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 PDSS1Q5T2R2 415 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF787Q6DD87 383 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 C22orf42Q6IC83 251 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 RBMS3Q6XE24 437 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 TMPRSS11AQ6ZMR5 421 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 IDO2Q6ZQW0 420 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 Q6ZS46 218 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 C1orf229Q6ZS94 237 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 C5orf24Q7Z6I8 188 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 RIMKLAQ8IXN7 391 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 OR2D3Q8NGH3 330 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 OR14K1Q8NGZ2 314 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 AENQ8WTP8 325 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 TIMP4Q99727 224 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 BARHL1Q9BZE3 327 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 FAM234AQ9H0X4 552 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 ESRP2Q9H6T0 727 aaKnown RBP4.56□□□□□ -1.68
CCDC39-205ENST00000485055 NDRG3Q9UGV2 375 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 GTF3C1Q12789 2109 aa4.56□□□□□ -1.68
CCDC39-205ENST00000485055 A0A0G2JK05 382 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 F8W036 122 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 NPIPB9F8W1W9 429 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 SYT7O43581 403 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 WISP2O76076 250 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 KLK1P06870 262 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 HCKP08631 526 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ANXA3P12429 323 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TBXA2RP21731 343 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 BGNP21810 368 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms