RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 GHRLQ9UBU3 117 aa12.17□□□□□ -0.46
CLK3-204ENST00000483723 CACNG2Q9Y698 323 aa12.17□□□□□ -0.46
CLK3-204ENST00000483723 CACNA1GO43497 2377 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 APC2O95996 2303 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 TRAV18A0A075B6X5 111 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 C5orf49A4QMS7 147 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 GMDSO60547 372 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 UBBP0CG47 229 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 GDNFP39905 211 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 SRP9P49458 86 aaKnown RBP12.16□□□□□ -0.46
CLK3-204ENST00000483723 CLVS2Q5SYC1 327 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 C1orf185Q5T7R7 199 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 OR10K2Q6IF99 312 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 MDP1Q86V88 176 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 TOMM5Q8N4H5 51 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 CHAC2Q8WUX2 184 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 SPSB1Q96BD6 273 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 SPACA5Q96QH8 159 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 NUDT16L1Q9BRJ7 211 aaKnown RBP12.16□□□□□ -0.46
CLK3-204ENST00000483723 MRPS28Q9Y2Q9 187 aaKnown RBP12.16□□□□□ -0.46
CLK3-204ENST00000483723 RAXQ9Y2V3 346 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 SPTBN2O15020 2390 aa12.16□□□□□ -0.46
CLK3-204ENST00000483723 FIGNL2A6NMB9 653 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 RAB27BO00194 218 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 SULT1C2O00338 296 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 TPOP07202 933 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 PTHLHP12272 177 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 ZNF14P17017 642 aaPredicted RBP12.15□□□□□ -0.46
CLK3-204ENST00000483723 SLC6A1P30531 599 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 CEACAM8P31997 349 aaPredicted RBP12.15□□□□□ -0.46
CLK3-204ENST00000483723 BTCP35070 178 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 PTGFRP43088 359 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 OR3A4PP47883 348 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 PMPCAQ10713 525 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 LINC00303Q3SY05 128 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 PLA1AQ53H76 456 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 AWAT2Q6E213 333 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 RAB12Q6IQ22 244 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 GLIPR1L1Q6UWM5 242 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 ZNF610Q8N9Z0 462 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 CNTNAP3BQ96NU0 1288 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 NEURL2Q9BR09 285 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 CNTNAP3Q9BZ76 1288 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 STARD10Q9Y365 291 aa12.15□□□□□ -0.46
CLK3-204ENST00000483723 FAM240BA0A1B0GVZ2 78 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 MEIOCA2RUB1 952 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 METTL21EPA6NDL7 271 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 H7C417 338 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 ICMTO60725 284 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 ECDO95905 644 aaPredicted RBP12.14□□□□□ -0.47
CLK3-204ENST00000483723 CCL2P13500 99 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 PRKACBP22694 351 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 APLNRP35414 380 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 MTFR2Q6P444 385 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 CDH24Q86UP0 819 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 PIAS4Q8N2W9 510 aaPredicted RBP12.14□□□□□ -0.47
CLK3-204ENST00000483723 WDR31Q8NA23 367 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 KCNG3Q8TAE7 436 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 ENKURQ8TC29 256 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 UBASH3BQ8TF42 649 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 GCDHQ92947 438 aaPredicted RBP12.14□□□□□ -0.47
CLK3-204ENST00000483723 PHF21AQ96BD5 680 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 MMP28Q9H239 520 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 NEK6Q9HC98 313 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 ZNF71Q9NQZ8 489 aaPredicted RBP12.14□□□□□ -0.47
CLK3-204ENST00000483723 GPR173Q9NS66 373 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 MYEF2Q9P2K5 600 aaKnown RBP12.14□□□□□ -0.47
CLK3-204ENST00000483723 KLK11Q9UBX7 282 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 MTFP1Q9UDX5 166 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 TUBD1Q9UJT1 453 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 PROCRQ9UNN8 238 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 MYO7BQ6PIF6 2116 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 ZNF816-ZNF321PA0A0X1KG74 233 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 ANKRD20A5PA0PJZ0 165 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 WIPF3A6NGB9 483 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 J3QW42 95 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 RAD51DO75771 328 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 LYZL6O75951 148 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 SCGNO76038 276 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 NRASP01111 189 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 NGFP01138 241 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 GSTT2BP0CG30 244 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 CBR1P16152 277 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 CCNOP22674 350 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 WNT5AP41221 380 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 ZP1P60852 638 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 SSBP1Q04837 148 aaKnown RBP12.14□□□□□ -0.47
CLK3-204ENST00000483723 GK2Q14410 553 aaPredicted RBP12.14□□□□□ -0.47
CLK3-204ENST00000483723 P2RY6Q15077 328 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 CNN3Q15417 329 aaKnown RBP12.14□□□□□ -0.47
CLK3-204ENST00000483723 MOGAT2Q3SYC2 334 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 RNASE12Q5GAN4 147 aaKnown RBP12.14□□□□□ -0.47
CLK3-204ENST00000483723 ASCL4Q6XD76 172 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 CD163Q86VB7 1156 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
CLK3-204ENST00000483723 SLC30A7Q8NEW0 376 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 GPX8Q8TED1 209 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 DEDD2Q8WXF8 326 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 PIGTQ969N2 578 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 FAM46BQ96A09 425 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms