RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SMAP2Q8WU79 429 aaPredicted RBP6.8□□□□□ -1.32
SNX13-208ENST00000482558 TSEN15Q8WW01 171 aaKnown RBP6.8□□□□□ -1.32
SNX13-208ENST00000482558 ASB13Q8WXK3 278 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 RGP1Q92546 391 aaPredicted RBP6.8□□□□□ -1.32
SNX13-208ENST00000482558 PIGKQ92643 395 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 SPSB1Q96BD6 273 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 UPRTQ96BW1 309 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 C8orf44Q96CB5 159 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 SCMH1Q96GD3 660 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 ZFP3Q96NJ6 502 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 ABHD6Q9BV23 337 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 EDEM2Q9BV94 578 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 SLCO1C1Q9NYB5 712 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 NUFIP1Q9UHK0 495 aaKnown RBP6.8□□□□□ -1.32
SNX13-208ENST00000482558 FBXO4Q9UKT5 387 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 MRPS7Q9Y2R9 242 aaKnown RBP6.8□□□□□ -1.32
SNX13-208ENST00000482558 EML5Q05BV3 1969 aa6.8□□□□□ -1.32
SNX13-208ENST00000482558 CABIN1Q9Y6J0 2220 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 A0A1W2PPK0 400 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 TMEM200CA6NKL6 621 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 GJE1A6NN92 205 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 H7C1C5 153 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 ADAM10O14672 748 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 MAGEB4O15481 346 aaPredicted RBP6.79□□□□□ -1.32
SNX13-208ENST00000482558 PRKNO60260 465 aaPredicted RBP6.79□□□□□ -1.32
SNX13-208ENST00000482558 RBBP9O75884 186 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 TGM6O95932 706 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 CTLA4P16410 223 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 ZNF17P17021 662 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 PSMB1P20618 241 aaKnown RBP6.79□□□□□ -1.32
SNX13-208ENST00000482558 GUCA1AP43080 201 aaPredicted RBP6.79□□□□□ -1.32
SNX13-208ENST00000482558 ACTBP60709 375 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 LCN6P62502 163 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 ACTG1P63261 375 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 ZFP36L1Q07352 338 aaKnown RBP6.79□□□□□ -1.32
SNX13-208ENST00000482558 SIGLEC14Q08ET2 396 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 DMWDQ09019 674 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 PDZK1IP1Q13113 114 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 OR7A5Q15622 319 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 RAB11BQ15907 218 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 PLPPR5Q32ZL2 321 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 WDR38Q5JTN6 314 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 C1orf185Q5T7R7 199 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 HES5Q5TA89 166 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 METTL11BQ5VVY1 283 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 C1QL3Q5VWW1 255 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 TMEM211Q6ICI0 200 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 IL20RBQ6UXL0 311 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 TMPRSS12Q86WS5 348 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 PRSS35Q8N3Z0 413 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 FADS6Q8N9I5 356 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 SLC38A9Q8NBW4 561 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 DNAAF1Q8NEP3 725 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 OR4K17Q8NGC6 315 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 OR6M1Q8NGM8 313 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 OR6X1Q8NH79 312 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 POC1BQ8TC44 478 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 ZFAND1Q8TCF1 268 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 RNASE8Q8TDE3 154 aaKnown RBP6.79□□□□□ -1.32
SNX13-208ENST00000482558 RNF133Q8WVZ7 376 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 CAPSLQ8WWF8 208 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 ST8SIA2Q92186 375 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 SNRNP40Q96DI7 357 aaKnown RBP6.79□□□□□ -1.32
SNX13-208ENST00000482558 BSCL2Q96G97 398 aaPredicted RBP6.79□□□□□ -1.32
SNX13-208ENST00000482558 SLC25A44Q96H78 314 aaPredicted RBP6.79□□□□□ -1.32
SNX13-208ENST00000482558 OXGR1Q96P68 337 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 ZNF747Q9BV97 191 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 TTTY10Q9BZA0 68 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 MRPL22Q9NWU5 206 aaKnown RBP6.79□□□□□ -1.32
SNX13-208ENST00000482558 MED11Q9P086 117 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 KLHL13Q9P2N7 655 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 OR5V1Q9UGF6 321 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 POU2F3Q9UKI9 436 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 FBXL3Q9UKT7 428 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 KLHDC2Q9Y2U9 406 aa6.79□□□□□ -1.32
SNX13-208ENST00000482558 MPDZO75970 2070 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 LAMA3Q16787 3333 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 REV3LO60673 3130 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 A0A0B4J293 547 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 IGHV3-20A0A0C4DH32 117 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 A0A1B0GUH1 482 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.78□□□□□ -1.32
SNX13-208ENST00000482558 ANKRD20A5PA0PJZ0 165 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 ZNF726A6NNF4 738 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 SNRPGP15A8MWD9 76 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 PRR32B1ATL7 298 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 OR2J2O76002 312 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 GLSO94925 669 aaPredicted RBP6.78□□□□□ -1.32
SNX13-208ENST00000482558 PMS2P2O95744 297 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 APOC1P02654 83 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 IL5P05113 134 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 CD3GP09693 182 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 H2BFMP0C1H6 154 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 ANXA3P12429 323 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 CPN1P15169 458 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 LAP3P28838 519 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 KIR3DL2P43630 455 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 DNASE1L1P49184 302 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 PTH2RP49190 550 aa6.78□□□□□ -1.32
SNX13-208ENST00000482558 CSNK2A1P68400 391 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms