RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 IGLV2-8P01709 118 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 MT-ND4P03905 459 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 CATP04040 527 aaKnown RBP3.01□□□□□ -1.93
SF3B1-210ENST00000482158 RALBP11234 206 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 OR2B8PP59922 312 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 TFDP2Q14188 446 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 C5orf64Q2M2E5 130 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 YIF1BQ5BJH7 314 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 CAVIN4Q5BKX8 364 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 FAM222AQ5U5X8 452 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 KDM4DQ6B0I6 523 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 CD300LGQ6UXG3 332 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 RAB43Q86YS6 212 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 TMEM105Q8N8V8 129 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 ST20-AS1Q8NBB2 130 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 DRAXINQ8NBI3 349 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-210ENST00000482158 FAM19A4Q96LR4 140 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 SCGB3A2Q96PL1 93 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 OR4K3Q96R72 315 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 TEAD3Q99594 435 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 SULT4A1Q9BR01 284 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 RHBDL2Q9NX52 303 aa3.01□□□□□ -1.93
SF3B1-210ENST00000482158 PLEKHG2Q9H7P9 1386 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 IGHV3-49A0A0A0MS15 119 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 A0A0A6YYD5 115 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 SLC22A20A6NK97 555 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 E2F6O75461 281 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 TRBV12-3P01733 135 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 THRAP10827 490 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 UBE2E1P51965 193 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 CMC4P56277 68 aaPredicted RBP3□□□□□ -1.93
SF3B1-210ENST00000482158 KLHL40Q2TBA0 621 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 GUSBP11Q6P575 273 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 OPN5Q6U736 354 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 ANGPTL8Q6UXH0 198 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 LYPD1Q8N2G4 141 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 TRAM1L1Q8N609 369 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 MIR7-3HGQ8N6C7 128 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 SLC35G3Q8N808 338 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 UBAC2Q8NBM4 344 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 CPNE4Q96A23 557 aaPredicted RBP3□□□□□ -1.93
SF3B1-210ENST00000482158 ISG20Q96AZ6 181 aaKnown RBP3□□□□□ -1.93
SF3B1-210ENST00000482158 UBE2E2Q96LR5 201 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 CHCHD7Q9BUK0 85 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 ZC4H2Q9NQZ6 224 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 FBXO8Q9NRD0 319 aa3□□□□□ -1.93
SF3B1-210ENST00000482158 PEF1Q9UBV8 284 aaKnown RBP3□□□□□ -1.93
SF3B1-210ENST00000482158 A0A0B4J2E0 115 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 PLIN3O60664 434 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 FARS2O95363 451 aaKnown RBP2.99□□□□□ -1.93
SF3B1-210ENST00000482158 NEFHP12036 1026 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 OR1G1P47890 313 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 AP1S2P56377 157 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 DAOAP59103 153 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 TSC22D1Q15714 1073 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 PRR9Q5T870 116 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 TMEM236Q5W0B7 351 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 OR2T5Q6IEZ7 315 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 MRPL21Q7Z2W9 205 aaKnown RBP2.99□□□□□ -1.93
SF3B1-210ENST00000482158 MDP1Q86V88 176 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 DRAM1Q8N682 238 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 PROKR2Q8NFJ6 384 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 OR2T29Q8NH02 315 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 OR1L1Q8NH94 360 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 ZNF721Q8TF20 911 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 ASZ1Q8WWH4 475 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 ISOC2Q96AB3 205 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 ZNF396Q96N95 335 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-210ENST00000482158 KCNS3Q9BQ31 491 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 CLSTN2Q9H4D0 955 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 PLEKHF2Q9H8W4 249 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 REEP1Q9H902 201 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 TREX1Q9NSU2 369 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 ZNHIT6Q9NWK9 470 aaKnown RBP2.99□□□□□ -1.93
SF3B1-210ENST00000482158 DDX19BQ9UMR2 479 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 FARSAQ9Y285 508 aaKnown RBP2.99□□□□□ -1.93
SF3B1-210ENST00000482158 HES2Q9Y543 173 aa2.99□□□□□ -1.93
SF3B1-210ENST00000482158 CCL15-CCL14A0A0B4J2E2 113 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 CYB5R3P00387 301 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-210ENST00000482158 IGLV3-19P01714 112 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 CD9P21926 228 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 OR1Q1Q15612 314 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 CCL15Q16663 113 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 LRRC52Q8N7C0 313 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 RERGQ96A58 199 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-210ENST00000482158 CERS2Q96G23 380 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 CTRCQ99895 268 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 CCDC94Q9BW85 323 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-210ENST00000482158 NUDT9Q9BW91 350 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 ZSCAN16Q9H4T2 348 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-210ENST00000482158 NOSIPQ9Y314 301 aaKnown RBP2.98□□□□□ -1.93
SF3B1-210ENST00000482158 SIGLEC1Q9BZZ2 1709 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 TRIP11Q15643 1979 aa2.98□□□□□ -1.93
SF3B1-210ENST00000482158 ARPC4-TTLL3A0A0A6YYG9 625 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 IGHV1-3A0A0C4DH29 117 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 BTNL10A8MVZ5 291 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 LINC01619G3V211 115 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 H3BN98 237 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 GFAPP14136 432 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 CCT6AP40227 531 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms