RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 OR4C16Q8NGL9 310 aa13.77□□□□□ -0.21
RXRA-202ENST00000481739 RNF170Q96K19 258 aa13.77□□□□□ -0.21
RXRA-202ENST00000481739 DMRTB1Q96MA1 342 aa13.77□□□□□ -0.21
RXRA-202ENST00000481739 OR2H1Q9GZK4 316 aa13.77□□□□□ -0.21
RXRA-202ENST00000481739 ZDHHC11Q9H8X9 412 aa13.77□□□□□ -0.21
RXRA-202ENST00000481739 SNRPGP15A8MWD9 76 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 C1QTNF9BB2RNN3 333 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 ZNF587BE7ETH6 402 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 C1QTNF9P0C862 333 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 CPN1P15169 458 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 HTR5AP47898 357 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 GZMKP49863 264 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 LINC00303Q3SY05 128 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 TMEM255AQ5JRV8 349 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 STEAP1BQ6NZ63 245 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 GLIPR1L1Q6UWM5 242 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 ZNF782Q6ZMW2 699 aaPredicted RBP13.76□□□□□ -0.21
RXRA-202ENST00000481739 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 SPSB1Q96BD6 273 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 ABHD17AQ96GS6 310 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 GPER1Q99527 375 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 URM1Q9BTM9 101 aaKnown RBP13.76□□□□□ -0.21
RXRA-202ENST00000481739 CST11Q9H112 138 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 TP63Q9H3D4 680 aaPredicted RBP13.76□□□□□ -0.21
RXRA-202ENST00000481739 UPB1Q9UBR1 384 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 NCOR2Q9Y618 2525 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 PSG4Q00888 419 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 MEF2DQ14814 521 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 ZMYND11Q15326 602 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 FCN2Q15485 313 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 ZNF260Q3ZCT1 412 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 TSPO2Q5TGU0 170 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 ZNF774Q6NX45 483 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 GABRG1Q8N1C3 465 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 SEMA6DQ8NFY4 1073 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 HYLS1Q96M11 299 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 SOX7Q9BT81 388 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 BEX2Q9BXY8 128 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 NKIRAS2Q9NYR9 191 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 ZNF224Q9NZL3 707 aa13.76□□□□□ -0.21
RXRA-202ENST00000481739 RGS13O14921 159 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 ARPC1BO15143 372 aaKnown RBP13.75□□□□□ -0.21
RXRA-202ENST00000481739 CD74P04233 296 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 GSTP1P09211 210 aaKnown RBP13.75□□□□□ -0.21
RXRA-202ENST00000481739 SULT1A3P0DMM9 295 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 SULT1A4P0DMN0 295 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 COX5BP10606 129 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 FCGR2AP12318 317 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 TBPP20226 339 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 VEGFCP49767 419 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 RIPPLY1Q0D2K3 151 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 FAPQ12884 760 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 ARL6IP1Q15041 203 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 C3AR1Q16581 482 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 OR10K2Q6IF99 312 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 GLDNQ6ZMI3 551 aaPredicted RBP13.75□□□□□ -0.21
RXRA-202ENST00000481739 Q6ZS92 163 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 Q6ZTK2 550 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 DPPA2Q7Z7J5 298 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 NAA40Q86UY6 237 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 ZNF584Q8IVC4 421 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 ZNF100Q8IYN0 542 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 RBMXL3Q8N7X1 1067 aaKnown RBP13.75□□□□□ -0.21
RXRA-202ENST00000481739 ACBD4Q8NC06 268 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 OR56B1Q8NGI3 324 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 OR10R2Q8NGX6 335 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 DACT3Q96B18 629 aaPredicted RBP13.75□□□□□ -0.21
RXRA-202ENST00000481739 APH1AQ96BI3 265 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 NKX3-1Q99801 234 aaPredicted RBP13.75□□□□□ -0.21
RXRA-202ENST00000481739 SLC25A21Q9BQT8 299 aaPredicted RBP13.75□□□□□ -0.21
RXRA-202ENST00000481739 TMEM59Q9BXS4 323 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 WNT5BQ9H1J7 359 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 OR10A4Q9H209 315 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 PIGLQ9Y2B2 252 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 ZNF175Q9Y473 711 aa13.75□□□□□ -0.21
RXRA-202ENST00000481739 IGKV1-9A0A0C4DH69 117 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 E9PLN8 166 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 XRCC2O43543 280 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 SSNA1O43805 119 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 RAB3DO95716 219 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 DBHP09172 617 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 MMP7P09237 267 aaPredicted RBP13.74□□□□□ -0.21
RXRA-202ENST00000481739 TNK1Q13470 666 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 CNN3Q15417 329 aaKnown RBP13.74□□□□□ -0.21
RXRA-202ENST00000481739 KISS1Q15726 138 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 TUSC5Q8IXB3 177 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 FNDC9Q8TBE3 224 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 SGK3Q96BR1 496 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 REEP6Q96HR9 211 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 C1orf147Q96MC9 270 aaPredicted RBP13.74□□□□□ -0.21
RXRA-202ENST00000481739 TECTBQ96PL2 329 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 PRDM14Q9GZV8 571 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 RANBP3Q9H6Z4 567 aaPredicted RBP13.74□□□□□ -0.21
RXRA-202ENST00000481739 NPDC1Q9NQX5 325 aaPredicted RBP13.74□□□□□ -0.21
RXRA-202ENST00000481739 SLC7A10Q9NS82 523 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 SPRR3Q9UBC9 169 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 ING4Q9UNL4 249 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 TP53TG5Q9Y2B4 290 aa13.74□□□□□ -0.21
RXRA-202ENST00000481739 ZNF736B4DX44 427 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms