RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 MZT1Q08AG7 82 aa15.36■□□□□ 0.05
CLK1-211ENST00000481641 TEX36Q5VZQ5 186 aa15.36■□□□□ 0.05
CLK1-211ENST00000481641 BTN2A1Q7KYR7 527 aa15.36■□□□□ 0.05
CLK1-211ENST00000481641 SHFQ7M4L6 423 aa15.36■□□□□ 0.05
CLK1-211ENST00000481641 THEM6Q8WUY1 208 aa15.36■□□□□ 0.05
CLK1-211ENST00000481641 WDFY2Q96P53 400 aa15.36■□□□□ 0.05
CLK1-211ENST00000481641 CCL13Q99616 98 aa15.36■□□□□ 0.05
CLK1-211ENST00000481641 OR10A2Q9H208 303 aa15.36■□□□□ 0.05
CLK1-211ENST00000481641 TRIM36Q9NQ86 728 aa15.36■□□□□ 0.05
CLK1-211ENST00000481641 KLHDC2Q9Y2U9 406 aa15.36■□□□□ 0.05
CLK1-211ENST00000481641 PRR23D1E9PI22 279 aaPredicted RBP15.35■□□□□ 0.05
CLK1-211ENST00000481641 P2RY10O00398 339 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 PRR23D2P0DMB1 279 aaPredicted RBP15.35■□□□□ 0.05
CLK1-211ENST00000481641 NAA10P41227 235 aaPredicted RBP15.35■□□□□ 0.05
CLK1-211ENST00000481641 GMFBP60983 142 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 IL13RA1P78552 427 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 WDR82Q6UXN9 313 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 PDZD9Q8IXQ8 264 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 BBS1Q8NFJ9 593 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 ST8SIA4Q92187 359 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 TMIGD2Q96BF3 282 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 PAPOLGQ9BWT3 736 aaKnown RBP15.35■□□□□ 0.05
CLK1-211ENST00000481641 SIRPDQ9H106 197 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 PRDM13Q9H4Q3 707 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 SP140LQ9H930 580 aa15.35■□□□□ 0.05
CLK1-211ENST00000481641 ARRDC5A6NEK1 342 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 FAM181BA6NEQ2 426 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 SRRM5B3KS81 715 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.34■□□□□ 0.05
CLK1-211ENST00000481641 CDIPTO14735 213 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 APOC1P02654 83 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 LIPFP07098 398 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 LYNP07948 512 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 PAICSP22234 425 aaKnown RBP15.34■□□□□ 0.05
CLK1-211ENST00000481641 ACKR3P25106 362 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 HCCSP53701 268 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 GK3PQ14409 553 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 WDR38Q5JTN6 314 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 METTL11BQ5VVY1 283 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 TMEM236Q5W0B7 351 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 Q6YL49 198 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.34■□□□□ 0.05
CLK1-211ENST00000481641 CPOQ8IVL8 374 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 PNLDC1Q8NA58 520 aaKnown RBP15.34■□□□□ 0.05
CLK1-211ENST00000481641 OR5T2Q8NGG2 359 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 OR52H1Q8NGJ2 320 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 OTOSQ8NHW6 89 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 LHX4Q969G2 390 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 LYZL4Q96KX0 146 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 C1orf21Q9H246 121 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 RNPEPL1Q9HAU8 725 aa15.34■□□□□ 0.05
CLK1-211ENST00000481641 AQP12BA6NM10 295 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 ZNF850A8MQ14 1090 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 E2F6O75461 281 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 TFF1P04155 84 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 OSMP13725 252 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 GNALP38405 381 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 CDK5Q00535 292 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 MICBQ29980 383 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 FIP1L1Q6UN15 594 aaKnown RBP15.33■□□□□ 0.04
CLK1-211ENST00000481641 AQP12AQ8IXF9 295 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 FAM216BQ8N7L0 139 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 RPL3LQ92901 407 aaKnown RBP15.33■□□□□ 0.04
CLK1-211ENST00000481641 ITPKCQ96DU7 683 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 CHIAQ9BZP6 476 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 FGF23Q9GZV9 251 aaPredicted RBP15.33■□□□□ 0.04
CLK1-211ENST00000481641 KAAG1Q9UBP8 84 aa15.33■□□□□ 0.04
CLK1-211ENST00000481641 WIPF1O43516 503 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 MELTFP08582 738 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 SELLP14151 372 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 AMY2BP19961 511 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 CFL1P23528 166 aaKnown RBP15.32■□□□□ 0.04
CLK1-211ENST00000481641 BPIFB3P59826 476 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 RPS7P62081 194 aaKnown RBP15.32■□□□□ 0.04
CLK1-211ENST00000481641 PRB3Q04118 309 aaPredicted RBP15.32■□□□□ 0.04
CLK1-211ENST00000481641 PRDX4Q13162 271 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 PRR31Q5SQ13 230 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 RHOUQ7L0Q8 258 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 SPATA24Q86W54 205 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 CSNK2A3Q8NEV1 391 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 GATAD2BQ8WXI9 593 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 PIGCQ92535 297 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 MICU1Q9BPX6 476 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 WDR13Q9H1Z4 485 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 NOX4Q9NPH5 578 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 SNTG1Q9NSN8 517 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 KIF17Q9P2E2 1029 aa15.32■□□□□ 0.04
CLK1-211ENST00000481641 RPUSD1Q9UJJ7 312 aaKnown RBP15.32■□□□□ 0.04
CLK1-211ENST00000481641 IGHV1-69DA0A0B4J2H0 117 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 TIPRLO75663 272 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 IGHV1-69P01742 117 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 HMGN1P05114 100 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 MUC1P15941 1255 aaPredicted RBP15.31■□□□□ 0.04
CLK1-211ENST00000481641 SRSF4Q08170 494 aaKnown RBP15.31■□□□□ 0.04
CLK1-211ENST00000481641 IKZF1Q13422 519 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 GALNT4Q8N4A0 578 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 ZNF454Q8N9F8 522 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 OR8B12Q8NGG6 310 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 TLNRD1Q9H1K6 362 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 ZNF696Q9H7X3 374 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms