RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 OR1M1Q8NGA1 313 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 OR2AE1Q8NHA4 323 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 SLC25A40Q8TBP6 338 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 KLF14Q8TD94 323 aaPredicted RBP8.74□□□□□ -1.01
USP39-215ENST00000481409 ADAT3Q96EY9 351 aaPredicted RBP8.74□□□□□ -1.01
USP39-215ENST00000481409 SORCS2Q96PQ0 1159 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 OR2J1Q9GZK6 312 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 NXF2Q9GZY0 626 aaKnown RBP8.74□□□□□ -1.01
USP39-215ENST00000481409 PPIL3Q9H2H8 161 aaKnown RBP8.74□□□□□ -1.01
USP39-215ENST00000481409 RNF167Q9H6Y7 350 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 METTL17Q9H7H0 456 aaPredicted RBP8.74□□□□□ -1.01
USP39-215ENST00000481409 PTTG3PQ9NZH4 202 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 ABRACLQ9P1F3 81 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 GHRLQ9UBU3 117 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 SLC7A11Q9UPY5 501 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 PCNX1Q96RV3 2341 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 IGLV3-9A0A075B6K5 115 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 A0A1B0GWJ7 208 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 DPRXA6NFQ7 191 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 IFITM5A6NNB3 132 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 AIPO00170 330 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 ABCD4O14678 606 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 IGHV3-13P01766 116 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 FAM157BP0CG42 384 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 CALCBP10092 127 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 FAHP16930 419 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 ACKR3P25106 362 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 KIR2DL3P43628 341 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 FUT6P51993 359 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 BSPH1Q075Z2 132 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 SNTB2Q13425 540 aaKnown RBP8.73□□□□□ -1.01
USP39-215ENST00000481409 TNK1Q13470 666 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 DAZAP2Q15038 168 aaPredicted RBP8.73□□□□□ -1.01
USP39-215ENST00000481409 FAM189A2Q15884 450 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 CEACAM21Q3KPI0 293 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 CEP78Q5JTW2 689 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 FAM27D1Q5T7N8 215 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 SFXN4Q6P4A7 337 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 LHFPL2Q6ZUX7 228 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 C22orf34Q6ZV56 151 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 DMRTC2Q8IXT2 367 aaPredicted RBP8.73□□□□□ -1.01
USP39-215ENST00000481409 PNLDC1Q8NA58 520 aaKnown RBP8.73□□□□□ -1.01
USP39-215ENST00000481409 ACBD4Q8NC06 268 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 OR8G5Q8NG78 346 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 OR56B2PQ8NGI1 322 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 OR5A2Q8NGI9 324 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 OR6M1Q8NGM8 313 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 SYNPRQ8TBG9 265 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 UBASH3BQ8TF42 649 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 CMBLQ96DG6 245 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 ZC3HAV1LQ96H79 300 aaKnown RBP8.73□□□□□ -1.01
USP39-215ENST00000481409 HIST1H2AAQ96QV6 131 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 SLIRPQ9GZT3 109 aaKnown RBP8.73□□□□□ -1.01
USP39-215ENST00000481409 TPK1Q9H3S4 243 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 TAS2R4Q9NYW5 299 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 PURGQ9UJV8 347 aaKnown RBP8.73□□□□□ -1.01
USP39-215ENST00000481409 CMAHPQ9Y471 501 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 EPG5Q9HCE0 2579 aa8.73□□□□□ -1.01
USP39-215ENST00000481409 KMT2BQ9UMN6 2715 aaPredicted RBP8.73□□□□□ -1.01
USP39-215ENST00000481409 HEATR1Q9H583 2144 aaKnown RBP8.72□□□□□ -1.01
USP39-215ENST00000481409 HIVEP3Q5T1R4 2406 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 TRAV8-7A0A075B6U6 113 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.72□□□□□ -1.01
USP39-215ENST00000481409 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.72□□□□□ -1.01
USP39-215ENST00000481409 A0A1W2PPK0 400 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 SHISA3A0PJX4 238 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 C5orf63A6NC05 138 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 OR5B21A6NL26 309 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 SLC17A2O00624 439 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 CLPXO76031 633 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 MAS1P04201 325 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 UBBP0CG47 229 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 ALDH3B1P43353 468 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 RBP2P50120 134 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 KLF3P57682 345 aaPredicted RBP8.72□□□□□ -1.01
USP39-215ENST00000481409 MXD1Q05195 221 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 PSG7Q13046 419 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 HNRNPA0Q13151 305 aaKnown RBP8.72□□□□□ -1.01
USP39-215ENST00000481409 CDSNQ15517 529 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 C1orf100Q5SVJ3 147 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 ADAM5Q6NVV9 412 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 SLC22A25Q6T423 547 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 ZDHHC23Q8IYP9 409 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 SSC4DQ8WTU2 575 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 TMEM171Q8WVE6 324 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 MRPL24Q96A35 216 aaKnown RBP8.72□□□□□ -1.01
USP39-215ENST00000481409 PTX4Q96A99 478 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 PLPPR2Q96GM1 343 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 DIRC2Q96SL1 478 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 SPOCK3Q9BQ16 436 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 TMEM204Q9BSN7 226 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 DCUN1D5Q9BTE7 237 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 PAPOLGQ9BWT3 736 aaKnown RBP8.72□□□□□ -1.01
USP39-215ENST00000481409 RHOFQ9HBH0 211 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 NPDC1Q9NQX5 325 aaPredicted RBP8.72□□□□□ -1.01
USP39-215ENST00000481409 PCDHB16Q9NRJ7 776 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 CA10Q9NS85 328 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 TMEM100Q9NV29 134 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 NKIRAS2Q9NYR9 191 aa8.72□□□□□ -1.01
USP39-215ENST00000481409 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms