RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 OR5AP2Q8NGF4 316 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 OR10R2Q8NGX6 335 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 RASSF5Q8WWW0 418 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 SLC25A38Q96DW6 304 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 PHB2Q99623 299 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 C20orf144Q9BQM9 153 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 OR51B5Q9H339 312 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 MAP1LC3AQ9H492 121 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 KCNJ16Q9NPI9 418 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 SNX10Q9Y5X0 201 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 ASXL1Q8IXJ9 1541 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 PIK3C2GO75747 1445 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 STK36Q9NRP7 1315 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 FAM240AA0A1B0GVK7 77 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 FOLR1P15328 257 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 IFNGR2P38484 337 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 PMELP40967 661 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 CDK9P50750 372 aaKnown RBP6.56□□□□□ -1.36
LSM5-210ENST00000480956 RAB38P57729 211 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 PON3Q15166 354 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 SLC18B1Q6NT16 456 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 PIP4P1Q86T03 277 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 CASTOR1Q8WTX7 329 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 RERGQ96A58 199 aaPredicted RBP6.56□□□□□ -1.36
LSM5-210ENST00000480956 PIK3IP1Q96FE7 263 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 NODALQ96S42 347 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 TMEM109Q9BVC6 243 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 PRSS22Q9GZN4 317 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 RHOFQ9HBH0 211 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 PAK5Q9P286 719 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 ERGIC3Q9Y282 383 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 ZNF256Q9Y2P7 627 aaPredicted RBP6.56□□□□□ -1.36
LSM5-210ENST00000480956 NLRP1Q9C000 1473 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 SETD1AO15047 1707 aaKnown RBP6.56□□□□□ -1.36
LSM5-210ENST00000480956 POLR1AO95602 1720 aaPredicted RBP6.56□□□□□ -1.36
LSM5-210ENST00000480956 IGHV4OR15-8A0A075B7B6 117 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 IGKV1D-8A0A087WSZ0 117 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 IGHV3-20A0A0C4DH32 117 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 SLC22A5O76082 557 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 PCCAP05165 728 aaPredicted RBP6.56□□□□□ -1.36
LSM5-210ENST00000480956 SERPINB1P30740 379 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 PAX9P55771 341 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 AQP6Q13520 282 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 HLA-DRB5Q30154 266 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 CEACAM21Q3KPI0 293 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 SLC25A35Q3KQZ1 300 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 PTAR1Q7Z6K3 402 aaPredicted RBP6.56□□□□□ -1.36
LSM5-210ENST00000480956 OR6V1Q8N148 313 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 METTL13Q8N6R0 699 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 OR51D1Q8NGF3 324 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 OR10X1Q8NGY0 326 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 OR10Z1Q8NGY1 313 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 C16orf78Q8WTQ4 265 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 TMEM54Q969K7 222 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 C11orf52Q96A22 123 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 DNAJC19Q96DA6 116 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 MAGEB18Q96M61 343 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 IL25Q9H293 177 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 TMEM9BQ9NQ34 198 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 ABCC13Q9NSE7 274 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 IMPAD1Q9NX62 359 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 TP53TG1Q9Y2A0 90 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 ALG5Q9Y673 324 aa6.56□□□□□ -1.36
LSM5-210ENST00000480956 ARHGEF28Q8N1W1 1705 aaKnown RBP6.56□□□□□ -1.36
LSM5-210ENST00000480956 QRICH2Q9H0J4 1663 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 ALKQ9UM73 1620 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 KIAA1210Q9ULL0 1709 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 A0A1W2PS18 150 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 DAPL1A0PJW8 107 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 ZNF17P17021 662 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 CEACAM6P40199 344 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 GPR6P46095 362 aaPredicted RBP6.55□□□□□ -1.36
LSM5-210ENST00000480956 RPL29P47914 159 aaKnown RBP6.55□□□□□ -1.36
LSM5-210ENST00000480956 TCL1AP56279 114 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 SPCS2Q15005 226 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 NRF1Q16656 503 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 OR2T5Q6IEZ7 315 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 FAM19A5Q7Z5A7 132 aaPredicted RBP6.55□□□□□ -1.36
LSM5-210ENST00000480956 OR6K3Q8NGY3 331 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 OR2T29Q8NH02 315 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 DHRS9Q9BPW9 319 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 COA1Q9GZY4 146 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 PCBD2Q9H0N5 130 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 CLMPQ9H6B4 373 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 ZNF446Q9NWS9 450 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 SPRR3Q9UBC9 169 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 SMPXQ9UHP9 88 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 ZNF391Q9UJN7 358 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 LAMC1P11047 1609 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 TMEM2Q9UHN6 1383 aa6.55□□□□□ -1.36
LSM5-210ENST00000480956 KDM5AP29375 1690 aaKnown RBP6.54□□□□□ -1.36
LSM5-210ENST00000480956 NRXN1Q9ULB1 1477 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 IGHV1OR21-1A0A087WYE8 117 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 IGHV2OR16-5A0A0B4J2B6 119 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 ERVV-2B6SEH9 535 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 DISC1C4P0D8 188 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 UGT2B11O75310 529 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 MT-ND4P03905 459 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 IDO1P14902 403 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 ZNF12P17014 697 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms