RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 LRRC30A6NM36 301 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CD300LBA8K4G0 201 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 A8MV72 311 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CLDN25C9JDP6 229 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 H0YJX3 145 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 H7C1C5 153 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 SLC16A6O15403 523 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 SSX4O60224 188 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 NCR1O76036 304 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 MPZL1O95297 269 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 LY6G6DO95868 133 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CLPTM1O96005 669 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CST4P01036 141 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 HLA-DQA2P01906 255 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 LYNP07948 512 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 OR2T7P0C7T2 308 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 FAM157CP0CG43 387 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 IGHV4-31P0DP07 118 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 IGFBP5P24593 272 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 HTR1FP30939 366 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 MPV17P39210 176 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 ALDH3B1P43353 468 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 GPR6P46095 362 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CDH15P55291 814 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CDC42P60953 191 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 LMO4P61968 165 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 LCN6P62502 163 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 ACTC1P68032 377 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 ACTA1P68133 377 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CD69Q07108 199 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 GK2Q14410 553 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 SNAPC1Q16533 368 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 C19orf54Q5BKX5 351 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 LPCAT4Q643R3 524 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 FAM166AQ6J272 317 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CFAP77Q6ZQR2 320 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 USP43Q70EL4 1123 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 MEPCEQ7L2J0 689 aaKnown RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 DPY19L4Q7Z388 723 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 DCXRQ7Z4W1 244 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 PEG10Q86TG7 708 aaKnown RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 LRP11Q86VZ4 500 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 LRRC28Q86X40 367 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 C1orf87Q8N0U7 546 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CIARTQ8N365 385 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 SPICQ8N5J4 248 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 OR2T27Q8NH04 317 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 ZFAND2BQ8WV99 257 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 NRG4Q8WWG1 115 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CMBLQ96DG6 245 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 SLAMF6Q96DU3 332 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 PLEKHA8Q96JA3 519 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 FOXN4Q96NZ1 517 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 TECTBQ96PL2 329 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 SIGLEC11Q96RL6 698 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CIB1Q99828 191 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 VRK1Q99986 396 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 C9orf16Q9BUW7 83 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 ABHD6Q9BV23 337 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 MROQ9BYG7 248 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 DNTTIP1Q9H147 329 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 TLNRD1Q9H1K6 362 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 RNPEPL1Q9HAU8 725 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 INPP5EQ9NRR6 644 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 KRT84Q9NSB2 600 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 DECR2Q9NUI1 292 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM100Q9NV29 134 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 CLN6Q9NWW5 311 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 KIF17Q9P2E2 1029 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 MYEF2Q9P2K5 600 aaKnown RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 KAAG1Q9UBP8 84 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 NUFIP1Q9UHK0 495 aaKnown RBP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.13□□□□□ -1.75
PTCD3-213ENST00000480102 POLR1DQ9Y2S0 133 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 STARD10Q9Y365 291 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 PCDHGB1Q9Y5G3 927 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 MPC1Q9Y5U8 109 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 HSPE1-MOB4S4R3N1 261 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 ZANQ9Y493 2812 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 C2CD3Q4AC94 2353 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 FREM1Q5H8C1 2179 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 USF3Q68DE3 2245 aa4.13□□□□□ -1.75
PTCD3-213ENST00000480102 ARID1AO14497 2285 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 MPDZO75970 2070 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ALPK2Q86TB3 2170 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 IGHV4-61A0A0C4DH41 118 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM210A6NLX4 147 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 F5H0A9 414 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 F5H5K5 113 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 J3QRE1 110 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 TIMM8AO60220 97 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 NOS1APO75052 506 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM127O75204 238 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 SRSF10O75494 262 aaKnown RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 TUSC2O75896 110 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 SOX14O95416 240 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 LY86O95711 162 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 LHBP01229 141 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 IFNA2P01563 188 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms