RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 VTCN1Q7Z7D3 282 aa13.98□□□□□ -0.17
HMGN1-212ENST00000479586 MKXQ8IYA7 352 aa13.98□□□□□ -0.17
HMGN1-212ENST00000479586 SPTSSAQ969W0 71 aa13.98□□□□□ -0.17
HMGN1-212ENST00000479586 PRSS22Q9GZN4 317 aa13.98□□□□□ -0.17
HMGN1-212ENST00000479586 MUC13Q9H3R2 512 aa13.98□□□□□ -0.17
HMGN1-212ENST00000479586 PPP1R3EQ9H7J1 279 aa13.98□□□□□ -0.17
HMGN1-212ENST00000479586 INPP5EQ9NRR6 644 aa13.98□□□□□ -0.17
HMGN1-212ENST00000479586 TCF19Q9Y242 345 aa13.98□□□□□ -0.17
HMGN1-212ENST00000479586 ANKRD30BLA7E2S9 258 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 CDIPTO14735 213 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 SLC2A1P11166 492 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 NAA10P41227 235 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-212ENST00000479586 MAGOHP61326 146 aaKnown RBP13.97□□□□□ -0.17
HMGN1-212ENST00000479586 SELENOWP63302 87 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 SLC36A3Q495N2 470 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 ARSJQ5FYB0 599 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-212ENST00000479586 CCDC121Q6ZUS5 278 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 RNF144BQ7Z419 303 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 DYNAPQ8N1N2 210 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 OR5AU1Q8NGC0 362 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 RAB3IPQ96QF0 476 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-212ENST00000479586 LYSTQ99698 3801 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 DNTTIP1Q9H147 329 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.97□□□□□ -0.17
HMGN1-212ENST00000479586 TMEM5Q9Y2B1 443 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 N6AMT1Q9Y5N5 214 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 V9GYY5 206 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-212ENST00000479586 DNAH1Q9P2D7 4330 aa13.97□□□□□ -0.17
HMGN1-212ENST00000479586 A6NDX4 124 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 VGLL3A8MV65 326 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 FXYD1O00168 92 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 SIGLEC5O15389 551 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 IFNW1P05000 195 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 OTX1P32242 354 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-212ENST00000479586 RPS27P42677 84 aaKnown RBP13.96□□□□□ -0.17
HMGN1-212ENST00000479586 VDAC2P45880 294 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-212ENST00000479586 RPS6KA3P51812 740 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 CAV3P56539 151 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 CYLC2Q14093 348 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-212ENST00000479586 TCTEX1D4Q5JR98 221 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 ERICH5Q6P6B1 374 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 DPY19L2P2Q6ZN68 376 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 LHFPL4Q7Z7J7 247 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 FAM185AQ8N0U4 392 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 ANGPTL6Q8NI99 470 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 MED30Q96HR3 178 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 RSRC1Q96IZ7 334 aaKnown RBP13.96□□□□□ -0.17
HMGN1-212ENST00000479586 NMNAT3Q96T66 252 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 TLNRD1Q9H1K6 362 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 FN3KQ9H479 309 aa13.96□□□□□ -0.17
HMGN1-212ENST00000479586 MRPL22Q9NWU5 206 aaKnown RBP13.96□□□□□ -0.17
HMGN1-212ENST00000479586 SYNGR1O43759 233 aa13.95□□□□□ -0.18
HMGN1-212ENST00000479586 HLA-DQA2P01906 255 aa13.95□□□□□ -0.18
HMGN1-212ENST00000479586 NHLRC4P0CG21 123 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-212ENST00000479586 TROVE2P10155 538 aaKnown RBP eCLIP13.95□□□□□ -0.18
HMGN1-212ENST00000479586 COX7A1P24310 79 aa13.95□□□□□ -0.18
HMGN1-212ENST00000479586 BLCAPP62952 87 aa13.95□□□□□ -0.18
HMGN1-212ENST00000479586 MXRA7P84157 204 aa13.95□□□□□ -0.18
HMGN1-212ENST00000479586 DRAM2Q6UX65 266 aa13.95□□□□□ -0.18
HMGN1-212ENST00000479586 RRM2BQ7LG56 351 aa13.95□□□□□ -0.18
HMGN1-212ENST00000479586 OR8J3Q8NGG0 315 aa13.95□□□□□ -0.18
HMGN1-212ENST00000479586 TSPEARQ8WU66 669 aa13.95□□□□□ -0.18
HMGN1-212ENST00000479586 ERMAPQ96PL5 475 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-212ENST00000479586 RPRD1BQ9NQG5 326 aaKnown RBP13.95□□□□□ -0.18
HMGN1-212ENST00000479586 GAR1Q9NY12 217 aaKnown RBP13.95□□□□□ -0.18
HMGN1-212ENST00000479586 TIPRLO75663 272 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 ACAA1P09110 424 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-212ENST00000479586 PSKH1P11801 424 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 PAICSP22234 425 aaKnown RBP13.94□□□□□ -0.18
HMGN1-212ENST00000479586 PRKXP51817 358 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 LGALS4P56470 323 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 CROCCP2Q86T23 111 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 ZNRF1Q8ND25 227 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 DPF1Q92782 380 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 SPSB4Q96A44 273 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 SH3GL1Q99961 368 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 TMEM120AQ9BXJ8 343 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 NSRP1Q9H0G5 558 aaKnown RBP13.94□□□□□ -0.18
HMGN1-212ENST00000479586 OPA3Q9H6K4 179 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 C19orf12Q9NSK7 152 aa13.94□□□□□ -0.18
HMGN1-212ENST00000479586 TCRBV4S1A1TA0A5B7 111 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 AKR7A2O43488 359 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 RENP00797 406 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 CHRM2P08172 466 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 DDOSTP39656 456 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 OMPP47874 163 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 ERVFRD-1P60508 538 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 FAM3AP98173 230 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 DCTN2Q13561 401 aaKnown RBP13.93□□□□□ -0.18
HMGN1-212ENST00000479586 SLC16A9Q7RTY1 509 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 ZBTB46Q86UZ6 589 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 OR4K13Q8NH42 304 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 RPS4Y2Q8TD47 263 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 RPL3LQ92901 407 aaKnown RBP13.93□□□□□ -0.18
HMGN1-212ENST00000479586 COPS4Q9BT78 406 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 CHID1Q9BWS9 393 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 HEXA-AS1Q9H8Q6 139 aa13.93□□□□□ -0.18
HMGN1-212ENST00000479586 TSSC4Q9Y5U2 329 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-212ENST00000479586 FAM90A8PA6NJQ4 464 aa13.92□□□□□ -0.18
HMGN1-212ENST00000479586 FAM220BPB1ANY3 271 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms