RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 HSPA12AO43301 675 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 CDC14BO60729 498 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 OR5AC1P0C628 307 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 OR1D2P34982 312 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 RAC1P63000 192 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 P2RY6Q15077 328 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 ZIC1Q15915 447 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 CCL14Q16627 93 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 MEP1BQ16820 701 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 OR52E1Q8NGJ3 308 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 URM1Q9BTM9 101 aaKnown RBP18.86■□□□□ 0.61
SDF4-206ENST00000478938 SRPK3Q9UPE1 567 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 V9GYS6 101 aa18.86■□□□□ 0.61
SDF4-206ENST00000478938 XKRY2A2RUG3 117 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 K7N7A8 449 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 XKRYO14609 159 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 CST2P09228 141 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 IGFBP3P17936 291 aaPredicted RBP18.85■□□□□ 0.61
SDF4-206ENST00000478938 P2RY1P47900 373 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 GATMP50440 423 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 H3F3AP84243 136 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 UNC119Q13432 240 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 ZNF880Q6PDB4 577 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 MRGPRX4Q96LA9 322 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 SLC25A13Q9UJS0 675 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 LMX1BO60663 402 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 RPS2P15880 293 aaKnown RBP18.85■□□□□ 0.61
SDF4-206ENST00000478938 EGR3Q06889 387 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 FBXW9Q5XUX1 488 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 ASTLQ6HA08 431 aaPredicted RBP18.85■□□□□ 0.61
SDF4-206ENST00000478938 C22orf15Q8WYQ4 148 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 CDH20Q9HBT6 801 aa18.85■□□□□ 0.61
SDF4-206ENST00000478938 POLR3KQ9Y2Y1 108 aaPredicted RBP18.85■□□□□ 0.61
SDF4-206ENST00000478938 M0QZK8 103 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 GGCTO75223 188 aaKnown RBP18.84■□□□□ 0.61
SDF4-206ENST00000478938 FGF5P12034 268 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 BATFQ16520 125 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 B9D1Q9UPM9 204 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 INSL5Q9Y5Q6 135 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 FANCMQ8IYD8 2048 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 APODP05090 189 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 SLC35G6P0C7Q6 338 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 CCR4P51679 360 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 BTN3A2P78410 334 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 OR5I1Q13606 314 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 PMS2P11Q13670 270 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 GPR18Q14330 331 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 C1orf194Q5T5A4 169 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 SMARCD2Q92925 531 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 TAAR8Q969N4 342 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 OR8D2Q9GZM6 311 aa18.84■□□□□ 0.61
SDF4-206ENST00000478938 APOBEC3BQ9UH17 382 aaKnown RBP18.84■□□□□ 0.61
SDF4-206ENST00000478938 KNG1P01042 644 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 ASCL1P50553 236 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 MAP2K5Q13163 448 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 IQCJQ1A5X6 159 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 LINC00114Q6XXX2 140 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 THRSPQ92748 146 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 SMDT1Q9H4I9 107 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 WSB1Q9Y6I7 421 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 KIR2DL5BA0A0G2JN68 375 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 KIR2DL5BA0A0G2JPC4 375 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 A6NIZ1 184 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 GRXCR1A8MXD5 290 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 ABLIM3O94929 683 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 FPR2P25090 351 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 DNASE1L1P49184 302 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 RAP1BP61224 184 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 ICAM4Q14773 271 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 SPSB3Q6PJ21 355 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 TIPARPQ7Z3E1 657 aaKnown RBP18.83■□□□□ 0.6
SDF4-206ENST00000478938 GALNTL5Q7Z4T8 443 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 RABEPKQ7Z6M1 372 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 MRPL41Q8IXM3 137 aaKnown RBP18.83■□□□□ 0.6
SDF4-206ENST00000478938 KIR2DL5AQ8N109 375 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 WFIKKN1Q96NZ8 548 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 ELOVL1Q9BW60 279 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 DNAJC4Q9NNZ3 241 aa18.83■□□□□ 0.6
SDF4-206ENST00000478938 MPDZO75970 2070 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 ZNF860A6NHJ4 632 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 XRCC2O43543 280 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 SNRNP200O75643 2136 aaKnown RBP18.82■□□□□ 0.6
SDF4-206ENST00000478938 CHRM2P08172 466 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 BRS3P32247 399 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 SLC11A1P49279 550 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 ELLP55199 621 aaPredicted RBP18.82■□□□□ 0.6
SDF4-206ENST00000478938 KIF26BQ2KJY2 2108 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 ITPRIPL2Q3MIP1 535 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 C1QL3Q5VWW1 255 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 HIST1H2AAQ96QV6 131 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 ZPBPQ9BS86 351 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 TRIM2Q9C040 744 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 PCBD2Q9H0N5 130 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 CNTD2Q9H8S5 307 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 PARD6AQ9NPB6 346 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 GPR173Q9NS66 373 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 DNAJB12Q9NXW2 375 aaKnown RBP18.82■□□□□ 0.6
SDF4-206ENST00000478938 DKKL1Q9UK85 242 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 CHD3Q12873 2000 aaKnown RBP18.82■□□□□ 0.6
SDF4-206ENST00000478938 SCGNO76038 276 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms