RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 GLSO94925 669 aaPredicted RBP3.29□□□□□ -1.88
UPF3B-203ENST00000478840 TRBV12-3P01733 135 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 SLC35G6P0C7Q6 338 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 DRD3P35462 400 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 PCK1P35558 622 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 P2RY2P41231 377 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 NOVP48745 357 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 IFFO1Q0D2I5 559 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 PNOCQ13519 176 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 RBMY1FQ15415 496 aaKnown RBP3.29□□□□□ -1.88
UPF3B-203ENST00000478840 FAM27D1Q5T7N8 215 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 EPGNQ6UW88 154 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 SLC16A13Q7RTY0 426 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 SYCE1Q8N0S2 351 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 OR5W2Q8NH69 310 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 RXFP2Q8WXD0 754 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 KCNS1Q96KK3 526 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 TMEM243Q9BU79 118 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 PORCNQ9H237 461 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 OR52D1Q9H346 318 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 ZNRD1Q9P1U0 126 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 CLEC2DQ9UHP7 191 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 TFR2Q9UP52 801 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 HES2Q9Y543 173 aa3.29□□□□□ -1.88
UPF3B-203ENST00000478840 IGLV4-69A0A075B6H9 119 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 TRAV19A0A0A6YYK7 116 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 RSPH10B2B2RC85 870 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 ZNF593O00488 134 aaPredicted RBP3.28□□□□□ -1.88
UPF3B-203ENST00000478840 PTTG1O95997 202 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 RSPH10BP0C881 870 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 PGAM1P18669 254 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 CD9P21926 228 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 RPS9P46781 194 aaKnown RBP3.28□□□□□ -1.88
UPF3B-203ENST00000478840 PRLHRP49683 370 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 CDK5Q00535 292 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 IFITM3Q01628 133 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 PPIDQ08752 370 aaKnown RBP3.28□□□□□ -1.88
UPF3B-203ENST00000478840 SYCNQ0VAF6 134 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 XRCC4Q13426 336 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 DEFB116Q30KQ4 102 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 TMEM236Q5W0B7 351 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 IGFL2Q6UWQ7 119 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 CALHM1Q8IU99 346 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 PGAM4Q8N0Y7 254 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 Q8N7P7 452 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 OR4D6Q8NGJ1 314 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 RXFP4Q8TDU9 374 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 TMEM239Q8WW34 195 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 CCDC124Q96CT7 223 aaKnown RBP3.28□□□□□ -1.88
UPF3B-203ENST00000478840 PDXPQ96GD0 296 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 CYYR1Q96J86 154 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 SFXN3Q9BWM7 321 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 FRMD8P1Q9BZ68 369 aaPredicted RBP3.28□□□□□ -1.88
UPF3B-203ENST00000478840 C6orf50Q9HD87 102 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 HEBP1Q9NRV9 189 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 SIGLEC7Q9Y286 467 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 POFUT2Q9Y2G5 429 aa3.28□□□□□ -1.88
UPF3B-203ENST00000478840 GOLGA8QA0A0J9YX86 632 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 MGAT4DA6NG13 374 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 M0R1B8 84 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 RAD51BO15315 384 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 SPAG7O75391 227 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 RPN2P04844 631 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 GALR1P47211 349 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 RGS19P49795 217 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 C2orf80Q0P641 193 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 INCA1Q0VD86 236 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 TOMM34Q15785 309 aaPredicted RBP3.27□□□□□ -1.89
UPF3B-203ENST00000478840 FAM78AQ5JUQ0 283 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 ACTL10Q5JWF8 245 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 KDM4DQ6B0I6 523 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 CLEC6AQ6EIG7 209 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 Q6ZVH6 145 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 WDR86Q86TI4 376 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 SLC7A5P1Q8MH63 180 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 RERGQ96A58 199 aaPredicted RBP3.27□□□□□ -1.89
UPF3B-203ENST00000478840 FLYWCH2Q96CP2 140 aaKnown RBP3.27□□□□□ -1.89
UPF3B-203ENST00000478840 NARS2Q96I59 477 aaKnown RBP3.27□□□□□ -1.89
UPF3B-203ENST00000478840 ZNF414Q96IQ9 312 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 GOLPH3Q9H4A6 298 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 NECAP2Q9NVZ3 263 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 RBFOX1Q9NWB1 397 aaKnown RBP3.27□□□□□ -1.89
UPF3B-203ENST00000478840 SLC7A11Q9UPY5 501 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 PSG11Q9UQ72 335 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 AP3M1Q9Y2T2 418 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 TMEM14AQ9Y6G1 99 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 PTPRTO14522 1441 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 AK9Q5TCS8 1911 aa3.27□□□□□ -1.89
UPF3B-203ENST00000478840 COL16A1Q07092 1604 aaPredicted RBP3.26□□□□□ -1.89
UPF3B-203ENST00000478840 ZNF608Q9ULD9 1512 aaPredicted RBP3.26□□□□□ -1.89
UPF3B-203ENST00000478840 TRAV8-4A0A0B4J246 113 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 A0A1B0GW15 77 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 A0A1W2PP18 115 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 ZNF207O43670 478 aaKnown RBP3.26□□□□□ -1.89
UPF3B-203ENST00000478840 FADS2O95864 444 aaKnown RBP3.26□□□□□ -1.89
UPF3B-203ENST00000478840 P01737 135 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 APCSP02743 223 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 APLNRP35414 380 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 RGS6P49758 472 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 ERFP50548 548 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms