RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ZNF878C9JN71 531 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 P2RY10O00398 339 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 GOSR2O14653 212 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SYT7O43581 403 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 RAD1O60671 282 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF354AO60765 605 aaPredicted RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 TOXO94900 526 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 MPZL1O95297 269 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 IGHG1P01857 330 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 TTRP02766 147 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CD3DP04234 171 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 ACSM4P0C7M7 580 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 RRASP10301 218 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 NR2C1P13056 603 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF35P13682 527 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 RPA2P15927 270 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CXCL2P19875 107 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 TBPP20226 339 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 M6PRP20645 277 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 MPZP25189 248 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 LAP3P28838 519 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 EPHA8P29322 1005 aaPredicted RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CALCRP30988 508 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 S100A11P31949 105 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 EIF1P41567 113 aaKnown RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CXCL12P48061 93 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 BIDP55957 195 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CLRN1P58418 232 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 FMODQ06828 376 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SPOCK1Q08629 439 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 FGL1Q08830 312 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SHBQ15464 509 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CDSNQ15517 529 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 FAM189A2Q15884 450 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 AANATQ16613 207 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 PLPPR5Q32ZL2 321 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 NHLRC3Q5JS37 347 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CLVS2Q5SYC1 327 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 OTPQ5XKR4 325 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 B3GNTL1Q67FW5 361 aaPredicted RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SIGIRRQ6IA17 410 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 C3orf33Q6P1S2 294 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 C11orf88Q6PI97 169 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 NHLRC1Q6VVB1 395 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 C16orf47Q6ZP98 133 aaPredicted RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SHISA6Q6ZSJ9 500 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 TMUB2Q71RG4 321 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 RHOUQ7L0Q8 258 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 OR2W3Q7Z3T1 314 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 BIVMQ86UB2 503 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 LYPD6Q86Y78 171 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF584Q8IVC4 421 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 NAXDQ8IW45 347 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 MUC20Q8N307 709 aaPredicted RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 KDM8Q8N371 416 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 BPIFB2Q8N4F0 458 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SLC22A24Q8N4F4 322 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 C12orf45Q8N5I9 185 aaPredicted RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 ZDHHC22Q8N966 263 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 OR2M3Q8NG83 312 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 OR1M1Q8NGA1 313 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 OR51A2Q8NGJ7 313 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 OR52B4Q8NGK2 314 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 OR2AJ1Q8NGZ0 328 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SUN5Q8TC36 379 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 POC1BQ8TC44 478 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 LRRC20Q8TCA0 184 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SCARB1Q8WTV0 552 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 AQP3Q92482 292 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 NAT6Q93015 286 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CLDN23Q96B33 292 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 ARL5BQ96KC2 179 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SFXN2Q96NB2 322 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 OXGR1Q96P68 337 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 OR6C1Q96RD1 312 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 PRRT1Q99946 306 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 WDR77Q9BQA1 342 aaPredicted RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CRB3Q9BUF7 120 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SSBP3Q9BWW4 388 aaPredicted RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 MRPL13Q9BYD1 178 aaKnown RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 PBOV1Q9GZY1 135 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SLC26A1Q9H2B4 701 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 KCNK15Q9H427 330 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 METTL7AQ9H8H3 244 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM138Q9NPI0 162 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CENPMQ9NSP4 180 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 FAM206AQ9NX38 181 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 MED29Q9NX70 200 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 SLC2A8Q9NY64 477 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 C11orf21Q9P2W6 132 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 KCNN3Q9UGI6 736 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 IL17BQ9UHF5 180 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 OPN4Q9UHM6 478 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 CYB5R1Q9UHQ9 305 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 NXT1Q9UKK6 140 aaKnown RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 NUP50Q9UKX7 468 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 VDAC3Q9Y277 283 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 POLR1DQ9Y2S0 133 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 HDGFL3Q9Y3E1 203 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 RHBDD3Q9Y3P4 386 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms