RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CAV3P56539 151 aa16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 KRTAP10-11P60412 298 aa16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 SLC35A2P78381 396 aa16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 COL10A1Q03692 680 aa16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 DGUOKQ16854 277 aa16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 OR5T2Q8NGG2 359 aa16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 SPSB4Q96A44 273 aa16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 RPRD1BQ9NQG5 326 aaKnown RBP16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 MRPL22Q9NWU5 206 aaKnown RBP16.39■□□□□ 0.21
PDLIM1-202ENST00000477757 STAB2Q8WWQ8 2551 aa16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 NPPAP01160 153 aa16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 MSX2P35548 267 aaPredicted RBP16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 OMPP47874 163 aa16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 COQ5Q5HYK3 327 aa16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 SMARCD3Q6STE5 483 aa16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 MED30Q96HR3 178 aa16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 RCC1LQ96I51 464 aaKnown RBP16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 ERMAPQ96PL5 475 aaPredicted RBP16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 RAB3IPQ96QF0 476 aaPredicted RBP16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 TMEM120AQ9BXJ8 343 aa16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 CDCA4Q9BXL8 241 aa16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 TMBIM4Q9HC24 238 aa16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 ZNF391Q9UJN7 358 aa16.38■□□□□ 0.21
PDLIM1-202ENST00000477757 VGLL3A8MV65 326 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 H0YAE9 185 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 CDIPTO14735 213 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 SIGLEC5O15389 551 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 XRCC2O43543 280 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 HLA-DQA2P01906 255 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 NDUFB7P17568 137 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 PAICSP22234 425 aaKnown RBP16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 MXRA7P84157 204 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 EGFEM1PQ0D2K5 195 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 IFI44LQ53G44 452 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 WDR13Q9H1Z4 485 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 SNTG1Q9NSN8 517 aa16.37■□□□□ 0.21
PDLIM1-202ENST00000477757 TRBV23-1A0A0A0MS06 115 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 A0A1W2PRQ8 180 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 A0A1W2PRX2 142 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 UNC119BA6NIH7 251 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 ARPC3O15145 178 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 PEX14O75381 377 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 ZNF682O95780 498 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 TFF1P04155 84 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 PF4V1P10720 104 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 SLC2A1P11166 492 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 HIST1H1CP16403 213 aaKnown RBP16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 DGCR6Q14129 220 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 CNN3Q15417 329 aaKnown RBP16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 CYP4Z1Q86W10 505 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 OR4C15Q8NGM1 316 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 OR10Z1Q8NGY1 313 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 ANGPTL6Q8NI99 470 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 FANK1Q8TC84 345 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 FN3KQ9H479 309 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 ELL3Q9HB65 397 aaPredicted RBP16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 TCF19Q9Y242 345 aa16.36■□□□□ 0.21
PDLIM1-202ENST00000477757 E9PQ18 207 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 MRASO14807 208 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 DUS4LO95620 317 aaKnown RBP16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 POU1F1P28069 291 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 NOS3P29474 1203 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 RPS27P42677 84 aaKnown RBP16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 GMFBP60983 142 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 CD83Q01151 205 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 SLC16A9Q7RTY1 509 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 ZDHHC21Q8IVQ6 265 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 CYB561A3Q8NBI2 242 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 OR4K13Q8NH42 304 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 HSH2DQ96JZ2 352 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 OR5M11Q96RB7 305 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 COPS4Q9BT78 406 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 PRSS22Q9GZN4 317 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 ENPP4Q9Y6X5 453 aa16.35■□□□□ 0.21
PDLIM1-202ENST00000477757 OR6C68A6NDL8 312 aa16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 BBIP1A8MTZ0 92 aa16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 PF4P02776 101 aa16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 H1F0P07305 194 aaKnown RBP16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 ACAA1P09110 424 aaPredicted RBP16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 ZNF823P16415 610 aa16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 PRKXP51817 358 aa16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 FAM3AP98173 230 aa16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 SPIBQ01892 262 aa16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 FGD3Q5JSP0 725 aa16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 MKXQ8IYA7 352 aa16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 KRCC1Q9NPI7 259 aaPredicted RBP16.34■□□□□ 0.21
PDLIM1-202ENST00000477757 A6NDX4 124 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 PSKH1P11801 424 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 SLC6A6P31641 620 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 SLC7A2P52569 658 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 METTL21CQ5VZV1 264 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 FKBP9P1Q75LS8 142 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 CBLL1Q75N03 491 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 TMEM219Q86XT9 240 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 FAM185AQ8N0U4 392 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 SDR9C7Q8NEX9 313 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 OR5K1Q8NHB7 308 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 KCNJ15Q99712 375 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 NSRP1Q9H0G5 558 aaKnown RBP16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 PPP1R3EQ9H7J1 279 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms