RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 APRG1Q8IVJ8 170 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 C10orf107Q8IVU9 208 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 SKA3Q8IX90 412 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 TDHQ8IZJ6 230 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 DAW1Q8N136 415 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 SMIM20Q8N5G0 67 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ATPAF2Q8N5M1 289 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ZNF557Q8N988 423 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 INO80EQ8NBZ0 244 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 LFNGQ8NES3 379 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 NOXO1Q8NFA2 376 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 OR9Q2Q8NGE9 314 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 OR4D5Q8NGN0 318 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 OR1L6Q8NGR2 347 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 OR6N2Q8NGY6 317 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ZNF420Q8TAQ5 688 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 SYNPRQ8TBG9 265 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 DCAKDQ8WVC6 231 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 FAM3CQ92520 227 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 TOMM40LQ969M1 308 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 RPEQ96AT9 228 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 RPUSD4Q96CM3 377 aaKnown RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 C10orf35Q96D05 121 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 SMIM8Q96KF7 97 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CAPZA3Q96KX2 299 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CNBD2Q96M20 576 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 GPR137Q96N19 417 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 AGAP4Q96P64 663 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 MBOAT4Q96T53 435 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ARHGDIGQ99819 225 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ATF6BQ99941 703 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 MICU1Q9BPX6 476 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 URM1Q9BTM9 101 aaKnown RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 SNHG12Q9BXW3 62 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CHST5Q9GZS9 411 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 TXNIPQ9H3M7 391 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 MFSD1Q9H3U5 465 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ALG9Q9H6U8 611 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 IL1RL2Q9HB29 575 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 PATZ1Q9HBE1 687 aaKnown RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 BEX1Q9HBH7 125 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 TMEM27Q9HBJ8 222 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 DNAJC4Q9NNZ3 241 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 C14orf105Q9NVL8 296 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 RNF186Q9NXI6 227 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CD84Q9UIB8 345 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 GNG8Q9UK08 70 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ZNF223Q9UK11 482 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 ZNF346Q9UL40 294 aaKnown RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 SLC7A7Q9UM01 511 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 PSG8Q9UQ74 426 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 FARSAQ9Y285 508 aaKnown RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 SLC17A4Q9Y2C5 497 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ZFP30Q9Y2G7 519 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 SLC6A5Q9Y345 797 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 HSPB11Q9Y547 144 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 SLIT3O75094 1523 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CDK13Q14004 1512 aaKnown RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 MAGI3Q5TCQ9 1506 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 DUOX2Q9NRD8 1548 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 REREQ9P2R6 1566 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 A0A1W2PRD5 423 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 SHISA7A6NL88 538 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 A8MWP6 167 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 A8MXK9 166 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 F5H5T6 163 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 GFYI3L273 518 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 K7EN84 100 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 M0R143 59 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 DCTN6O00399 190 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 CLDN5O00501 218 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 PLPP3O14495 311 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 EI24O14681 340 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 MSH4O15457 936 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 RAD51CO43502 376 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 SNAP91O60641 907 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 TPST2O60704 377 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 OR2B3O76000 313 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 ANXA9O76027 345 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 SCGNO76038 276 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 NKX2-2O95096 273 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 VENTXO95231 258 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 FARS2O95363 451 aaKnown RBP2.05□□□□□ -2.08
XRN1-211ENST00000477237 FGF19O95750 216 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 RAB36O95755 333 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 SLC25A27O95847 323 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 HAND1O96004 215 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 TIMP1P01033 207 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 HLA-AP01891 365 aaKnown RBP2.05□□□□□ -2.08
XRN1-211ENST00000477237 ISG15P05161 165 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 BCHEP06276 602 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 CSF3P09919 207 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 UQCRBP14927 111 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 CELP19835 753 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 OMGP23515 440 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 FCARP24071 287 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 ADORA2BP29275 332 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 S100GP29377 79 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 HTR1FP30939 366 aa2.05□□□□□ -2.08
XRN1-211ENST00000477237 ASCL1P50553 236 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms