RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 MSI2Q96DH6 328 aaKnown RBP8.17□□□□□ -1.1
HDAC3-208ENST00000476739 ZNF649Q9BS31 505 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 ADAT1Q9BUB4 502 aaKnown RBP8.17□□□□□ -1.1
HDAC3-208ENST00000476739 ADI1Q9BV57 179 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 FGF23Q9GZV9 251 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-208ENST00000476739 RGCCQ9H4X1 137 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 OPA3Q9H6K4 179 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 PALMDQ9NP74 551 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 UFSP2Q9NUQ7 469 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 NUFIP1Q9UHK0 495 aaKnown RBP8.17□□□□□ -1.1
HDAC3-208ENST00000476739 GTF2A1LQ9UNN4 478 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 PPP1R3CQ9UQK1 317 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 RHBDD3Q9Y3P4 386 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 R4GMQ9 66 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 ZANQ9Y493 2812 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 MTORP42345 2549 aa8.17□□□□□ -1.1
HDAC3-208ENST00000476739 A0A0U1RQV5 110 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 A0A1B0GTI1 187 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 METTL15A6NJ78 407 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 ACOD1A6NK06 481 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 C3orf80F5H4A9 247 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 LOC110117498-PIK3R3F6TDL0 507 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 TMEM178BH3BS89 294 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 H3BSH0 61 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 MPZL2O60487 215 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 GMDSO60547 372 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 IGHV2-70P01814 119 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 KRT8P05787 483 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 DDOSTP39656 456 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 GATA4P43694 442 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 SRP9P49458 86 aaKnown RBP8.16□□□□□ -1.1
HDAC3-208ENST00000476739 OR12D2P58182 307 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 LMO4P61968 165 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 ZMYND11Q15326 602 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 ODF4Q2M2E3 257 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 CDONQ4KMG0 1287 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 C6orf52Q5T4I8 152 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 LAIR2Q6ISS4 152 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 Q6ZNX1 250 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 ZNF826PQ6ZT77 177 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 LHFPL3Q86UP9 236 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 CATSPERDQ86XM0 798 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 C11orf53Q8IXP5 236 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 ELMOD2Q8IZ81 293 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 PRSS35Q8N3Z0 413 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 C19orf18Q8NEA5 215 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 FAM71F1Q96KD3 344 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-208ENST00000476739 MRPS26Q9BYN8 205 aaKnown RBP8.16□□□□□ -1.1
HDAC3-208ENST00000476739 GPR84Q9NQS5 396 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 C8orf4Q9NR00 106 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 YAE1D1Q9NRH1 226 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 ACOXLQ9NUZ1 547 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 RHBDL2Q9NX52 303 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 UBAP1Q9NZ09 502 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 GNG8Q9UK08 70 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 OR52A1Q9UKL2 312 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 TLN2Q9Y4G6 2542 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 SNX5Q9Y5X3 404 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 NPTNQ9Y639 398 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 ZFHX3Q15911 3703 aa8.16□□□□□ -1.1
HDAC3-208ENST00000476739 DAPL1A0PJW8 107 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 ISPDA4D126 451 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 A6NIN4 97 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 SNTNA6NMZ2 147 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 ANKRD30BLA7E2S9 258 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 ZNF850A8MQ14 1090 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 P2RY10O00398 339 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 LMX1BO60663 402 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 FAM20BO75063 409 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 SULT1C4O75897 302 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 PTBP3O95758 552 aaKnown RBP8.15□□□□□ -1.1
HDAC3-208ENST00000476739 IGHA1P01876 353 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 GRPP07492 148 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 HOXB4P17483 251 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-208ENST00000476739 CFL1P23528 166 aaKnown RBP8.15□□□□□ -1.1
HDAC3-208ENST00000476739 THBS2P35442 1172 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 CAPGP40121 348 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 KIR3DL2P43630 455 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 HSPA13P48723 471 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 AQP4P55087 323 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 PRDX4Q13162 271 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 WDR38Q5JTN6 314 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 BCL2L15Q5TBC7 163 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 TTC23Q5W5X9 447 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 CYB5R2Q6BCY4 276 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 COMMD2Q86X83 199 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 RDH10Q8IZV5 341 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 ACBD7Q8N6N7 88 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 CELF2-AS1Q8N7Q2 184 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 OR52I1Q8NGK6 324 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 HPSE2Q8WWQ2 592 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 PIGCQ92535 297 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 HPS1Q92902 700 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 RAB1CQ92928 201 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 C1orf159Q96HA4 380 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 Q96MT0 163 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 PAPOLGQ9BWT3 736 aaKnown RBP8.15□□□□□ -1.1
HDAC3-208ENST00000476739 SLC22A4Q9H015 551 aa8.15□□□□□ -1.1
HDAC3-208ENST00000476739 ISG20L2Q9H9L3 353 aaKnown RBP8.15□□□□□ -1.1
HDAC3-208ENST00000476739 MRPS18AQ9NVS2 196 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms