RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 SFRP4Q6FHJ7 346 aaPredicted RBP9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 DEGS2Q6QHC5 323 aa9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 BOLLQ8N9W6 283 aaKnown RBP9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 C19orf18Q8NEA5 215 aa9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 OR8B12Q8NGG6 310 aa9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 LRTOMTQ8WZ04 291 aa9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 TEAD3Q99594 435 aa9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 SLC6A7Q99884 636 aa9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 MICU1Q9BPX6 476 aa9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 H2AFY2Q9P0M6 372 aaPredicted RBP9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 ZNF319Q9P2F9 582 aa9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 NUP50Q9UKX7 468 aa9.51□□□□□ -0.89
NUDCD3-206ENST00000475952 ZAR1LA6NP61 321 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 C3orf80F5H4A9 247 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 TRIM77I1YAP6 450 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 NDUFA2O43678 99 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 MITFO75030 526 aaPredicted RBP9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 ZNF254O75437 659 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 PPIAL4GP0DN37 164 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 DCTDP32321 178 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 PSMB10P40306 273 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 RIDAP52758 137 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 ZNF829Q3KNS6 432 aaPredicted RBP9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 WDR25Q64LD2 544 aaPredicted RBP9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 LYPD2Q6UXB3 125 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 RBMS3Q6XE24 437 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 ZNF826PQ6ZT77 177 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 MEPCEQ7L2J0 689 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 AMIGO2Q86SJ2 522 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 COMMD2Q86X83 199 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 GID4Q8IVV7 300 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 GCSAMQ8N6F7 178 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 TCEANCQ8N8B7 351 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 FAM81AQ8TBF8 368 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 TMEM163Q8TC26 289 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 RAB40AQ8WXH6 277 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 ASB17Q8WXJ9 295 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 TECTBQ96PL2 329 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 MNTQ99583 582 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 RTL8AQ9BWD3 113 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 SEMA6AQ9H2E6 1030 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 RNPEPL1Q9HAU8 725 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 ERVK-18Q9QC07 812 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 IKZF2Q9UKS7 526 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 MPC1Q9Y5U8 109 aa9.5□□□□□ -0.89
NUDCD3-206ENST00000475952 A0A0U1RQV5 110 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 TMEM269A0A1B0GVZ9 245 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 ACOD1A6NK06 481 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 TMEM210A6NLX4 147 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 M0R129 80 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 PSMD9O00233 223 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 ADAM20O43506 726 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 ENSAO43768 121 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 HCCSP53701 268 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 ACTR3P61158 418 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 ACTG1P63261 375 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 PAX2Q02962 417 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 PAX8Q06710 450 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 PRDX4Q13162 271 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 CD276Q5ZPR3 534 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 C12orf73Q69YU5 71 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 CCDC121Q6ZUS5 278 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 WDR86Q86TI4 376 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 ZDHHC23Q8IYP9 409 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 ZNF679Q8IYX0 411 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 GALNT4Q8N4A0 578 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 OR1M1Q8NGA1 313 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 LRRC29Q8WV35 223 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 C22orf15Q8WYQ4 148 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 ITFG2Q969R8 447 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 CENPNQ96H22 339 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 OR8B4Q96RC9 309 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 CIB1Q99828 191 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 NUDT16L1Q9BRJ7 211 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 OSBPL10Q9BXB5 764 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 TTTY10Q9BZA0 68 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 MOB1AQ9H8S9 216 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 FAM206AQ9NX38 181 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 OAZ3Q9UMX2 235 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 RHBDD3Q9Y3P4 386 aa9.49□□□□□ -0.89
NUDCD3-206ENST00000475952 TRAV40A0A0B4J280 105 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 ZNF816-ZNF321PA0A0X1KG74 233 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 KIR2DS1A0A191URI9 304 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 ZNF850A8MQ14 1090 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 ZNF670-ZNF695F2Z2N8 137 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 CST4P01036 141 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 LHBP01229 141 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 MUC1P15941 1255 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 ACKR3P25106 362 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 EPHA2P29317 976 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 MAP2K3P46734 347 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 CXCR4P61073 352 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 CSNK2BP67870 215 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 HOXA4Q00056 320 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 ROM1Q03395 351 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 MICBQ29980 383 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 AADACL4Q5VUY2 407 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 TEX36Q5VZQ5 186 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 ZNF322Q6U7Q0 402 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms