RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 C8orf44Q96CB5 159 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 BTF3L4Q96K17 158 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 OR10C1Q96KK4 312 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 TSPAN32Q96QS1 320 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 RAB40CQ96S21 281 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 SEPHS2Q99611 448 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 MICU1Q9BPX6 476 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 SOSTQ9BQB4 213 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 SLC39A8Q9C0K1 460 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 ARL6Q9H0F7 186 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 GABARAPL1Q9H0R8 117 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 NXF5Q9H1B4 397 aaKnown RBP3.43□□□□□ -1.86
LSM2-211ENST00000475835 SMDT1Q9H4I9 107 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 RNF167Q9H6Y7 350 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 A4GALTQ9NPC4 353 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 ACP6Q9NPH0 428 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 PRSS16Q9NQE7 514 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 TMEM100Q9NV29 134 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 ZNF586Q9NXT0 402 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 BET1LQ9NYM9 111 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 KLRF1Q9NZS2 232 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 THAP10Q9P2Z0 257 aaPredicted RBP3.43□□□□□ -1.86
LSM2-211ENST00000475835 LPAR3Q9UBY5 353 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 KCNE5Q9UJ90 142 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 HSPB8Q9UJY1 196 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 CBLCQ9ULV8 474 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 DHDHQ9UQ10 334 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 SIGLEC9Q9Y336 463 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 MRPS16Q9Y3D3 137 aaKnown RBP3.43□□□□□ -1.86
LSM2-211ENST00000475835 PPIAL4AQ9Y536 164 aa3.43□□□□□ -1.86
LSM2-211ENST00000475835 MIA3Q5JRA6 1907 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 SCN8AQ9UQD0 1980 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 MGAMO43451 1857 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 hCG_1818297A0A087WSY0 165 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 LOC102723996A0A087X1L8 192 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 KIR2DS1A0A191URI9 304 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 CCDC195A0A1B0GUA6 201 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 FAM95CA0A1B0GW59 222 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 A0A1W2PPM1 405 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 A0A1W2PPV9 198 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 KANTRA0A1W2PQU2 76 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 A0A1W2PRS3 328 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 FEZF1A0PJY2 475 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 GXYLT2A0PJZ3 443 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 C7orf77A4D0Y5 90 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 LRP5LA4QPB2 252 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 DDTLA6NHG4 134 aaPredicted RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 ZNF705GA8MUZ8 300 aaPredicted RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 IDSB3KWA1 339 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 F5H768 121 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 BCL2L11O43521 198 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 MPZL2O60487 215 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 VENTXO95231 258 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 MBPP02686 304 aaPredicted RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 ALDOBP05062 364 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 PRKCGP05129 697 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 CSN2P05814 226 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 DBIP07108 87 aaKnown RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 RAB40ALP0C0E4 278 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 FTH1P19P0C7X4 201 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 HOXB9P17482 250 aaPredicted RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 CXCL3P19876 107 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 ALOX5APP20292 161 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 IDSP22304 550 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 NME2P22392 152 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 NFYBP25208 207 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 HTR1EP28566 365 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 TIA1P31483 386 aaKnown RBP eCLIP3.42□□□□□ -1.863e-14■■□□□ 12.5
LSM2-211ENST00000475835 ELK3P41970 407 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 CDKN2BP42772 138 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 PRLHRP49683 370 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 THBS3P49746 956 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 SULT1A1P50225 295 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 ATP4BP51164 291 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 POLR2HP52434 150 aaKnown RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 ZNF140P52738 457 aaPredicted RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 TIRAPP58753 221 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 UBE2KP61086 200 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 RHOBP62745 196 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 DYNLT1P63172 113 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 HIST1H3AP68431 136 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 SRPXP78539 464 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 NTHL1P78549 312 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 PLCXD2Q0VAA5 305 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 ST3GAL3Q11203 375 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 CDK5R2Q13319 367 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 OR2F1Q13607 317 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 IL10RAQ13651 578 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 ELAVL3Q14576 367 aaKnown RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 GNMTQ14749 295 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 KIR2DS1Q14954 304 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 GABRA6Q16445 453 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 ACKR1Q16570 336 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 GSG1Q2KHT4 349 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 CTU2Q2VPK5 515 aaKnown RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 MS4A18Q3C1V0 323 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 TRMT12Q53H54 448 aaKnown RBP3.42□□□□□ -1.86
LSM2-211ENST00000475835 TMEM97Q5BJF2 176 aa3.42□□□□□ -1.86
LSM2-211ENST00000475835 TIMM23BQ5SRD1 257 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms