RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 OR10R2Q8NGX6 335 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 ZNF224Q9NZL3 707 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 CSAG2Q9Y5P2 127 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 DNAJC13O75165 2243 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 FAM172BPA6NC97 362 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 WIPF3A6NGB9 483 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 SMLR1H3BR10 107 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 CDC14BO60729 498 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 RAB3DO95716 219 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 CHRM2P08172 466 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 MMP7P09237 267 aaPredicted RBP13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 ANXA7P20073 488 aaKnown RBP13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 GZMKP49863 264 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 FAPQ12884 760 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 PABPC1L2AQ5JQF8 200 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 FJX1Q86VR8 437 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 ZNF584Q8IVC4 421 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 OR5D18Q8NGL1 313 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 C1orf147Q96MC9 270 aaPredicted RBP13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 NUDT16L1Q9BRJ7 211 aaKnown RBP13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 TMEM59Q9BXS4 323 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 SELENOIQ9C0D9 397 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 LPAR5Q9H1C0 372 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 BANF2Q9H503 90 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 ING4Q9UNL4 249 aa13.41□□□□□ -0.26
RPUSD3-215ENST00000475470 RPL36A-HNRNPH2H7BZ11 118 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 CRTAPO75718 401 aaPredicted RBP13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 FCGR2AP12318 317 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 ANXA3P12429 323 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 GNB3P16520 340 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 ZNF24P17028 368 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 WT1P19544 449 aaPredicted RBP13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 CXCL3P19876 107 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 PTGFRP43088 359 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 RIPPLY1Q0D2K3 151 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 STK11Q15831 433 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 FAM189A2Q15884 450 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 SLC22A6Q4U2R8 563 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 GLDNQ6ZMI3 551 aaPredicted RBP13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 TRAPPC6BQ86SZ2 158 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 LIX1LQ8IVB5 337 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 ZNF100Q8IYN0 542 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 MS4A3Q96HJ5 214 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 TMEM246Q9BRR3 403 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 NICN1Q9BSH3 213 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 KLK13Q9UKR3 277 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 A0A096LPE4 126 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 A0A1W2PPZ6 126 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 DHRS7CA6NNS2 312 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 ZNF736B4DX44 427 aaPredicted RBP13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 PYCARD-AS1I3L0S3 204 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 MELTFP08582 738 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 SULT1A3P0DMM9 295 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 SULT1A4P0DMN0 295 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 NOVA1P51513 510 aaKnown RBP13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 CDK10Q15131 360 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 ASCC1Q8N9N2 400 aaKnown RBP13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 PIGTQ969N2 578 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 WDYHV1Q96HA8 205 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 S100A13Q99584 98 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 SEC22CQ9BRL7 303 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 URM1Q9BTM9 101 aaKnown RBP13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 CST11Q9H112 138 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 ZDHHC11Q9H8X9 412 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 GPN1Q9HCN4 374 aaPredicted RBP13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 GHRLQ9UBU3 117 aa13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 ZNF107Q9UII5 783 aaPredicted RBP13.4□□□□□ -0.26
RPUSD3-215ENST00000475470 PTPRBP23467 1997 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 M0QYG6 137 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 FABP7O15540 132 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 RLN1P04808 185 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 CEACAM1P13688 526 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 CPN1P15169 458 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 ACKR3P25106 362 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 TNFAIP8L1Q8WVP5 186 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 MED30Q96HR3 178 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 GPR173Q9NS66 373 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 SPRR3Q9UBC9 169 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 ZNF391Q9UJN7 358 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 A0A1W2PP11 408 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 MECP2P51608 486 aaKnown RBP13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 PMP22Q01453 160 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 NUFIP2Q7Z417 695 aaKnown RBP13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 CPEB3Q8NE35 698 aaKnown RBP13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 NUDCD2Q8WVJ2 157 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 PRRX2Q99811 253 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 TRAF4Q9BUZ4 470 aaPredicted RBP13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 TINAGL1Q9GZM7 467 aaPredicted RBP13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 RGCCQ9H4X1 137 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 ZNF69Q9UC07 566 aa13.39□□□□□ -0.27
RPUSD3-215ENST00000475470 AMY2AP04746 511 aa13.38□□□□□ -0.27
RPUSD3-215ENST00000475470 IL5P05113 134 aa13.38□□□□□ -0.27
RPUSD3-215ENST00000475470 NBL1P41271 181 aa13.38□□□□□ -0.27
RPUSD3-215ENST00000475470 PIAS4Q8N2W9 510 aaPredicted RBP13.38□□□□□ -0.27
RPUSD3-215ENST00000475470 OR56B1Q8NGI3 324 aa13.38□□□□□ -0.27
RPUSD3-215ENST00000475470 LILRB4Q8NHJ6 448 aa13.38□□□□□ -0.27
RPUSD3-215ENST00000475470 RAB3CQ96E17 227 aa13.38□□□□□ -0.27
RPUSD3-215ENST00000475470 IFT46Q9NQC8 304 aa13.38□□□□□ -0.27
RPUSD3-215ENST00000475470 A0A0A6YYD4 124 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms