RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 EDDM3AQ14507 147 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 TAL2Q16559 108 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 CDKN3Q16667 212 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 AWAT2Q6E213 333 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 LCTLQ6UWM7 567 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 UGT2A3Q6UWM9 527 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 UNQ6126/PRO20091Q6UXV3 157 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF620Q6ZNG0 422 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 MAVSQ7Z434 540 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 HAPLN4Q86UW8 402 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 CD163Q86VB7 1156 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 PDZD9Q8IXQ8 264 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 BLIDQ8IZY5 108 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF420Q8TAQ5 688 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ATG4AQ8WYN0 398 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ROPN1LQ96C74 230 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 REEP6Q96HR9 211 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 KIRREL1Q96J84 757 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 C20orf173Q96LM9 149 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 UHRF2Q96PU4 802 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 MRIQ9BWK5 157 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 EFCAB1Q9HAE3 211 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 NMRAL1Q9HBL8 299 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 NOX4Q9NPH5 578 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 MRPS17Q9Y2R5 130 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 STAB1Q9NY15 2570 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ANKHD1Q8IWZ3 2542 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 MED13LQ71F56 2210 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ITPR2Q14571 2701 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 TINCRA0A1B0GVN0 87 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 RPS10-NUDT3A0A1W2PQS6 291 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 C1orf196B1AJZ1 125 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 KIR2DS3K7RE56 304 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 PRKAB2O43741 272 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 WDR1O75083 606 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 CNMDO75829 334 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 NUDT3O95989 172 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 HPXP02790 462 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ESR1P03372 595 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 PVALBP20472 110 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 IDSP22304 550 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 GLP1RP43220 463 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 TIAL1Q01085 375 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 OR2F1Q13607 317 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 KIR2DS3Q14952 304 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 QPRTQ15274 297 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 C1orf220Q5T0J3 134 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 CXCL17Q6UXB2 119 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 GLT6D1Q7Z4J2 308 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 PIP4P1Q86T03 277 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 OR52E4Q8NGH9 312 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 OR5R1Q8NH85 324 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 RNF138Q8WVD3 245 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 EEF1AKMT1Q8WVE0 214 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 CLEC4DQ8WXI8 215 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 OR5P2Q8WZ92 322 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 MRPS31Q92665 395 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 DUX3Q96PT4 197 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 OR52E6Q96RD3 313 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 P2RX4Q99571 388 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 SULT4A1Q9BR01 284 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 TM6SF1Q9BZW5 370 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ACSS3Q9H6R3 686 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF696Q9H7X3 374 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF230Q9UIE0 474 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 CDC42EP3Q9UKI2 254 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 LSM4Q9Y4Z0 139 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 CABIN1Q9Y6J0 2220 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 DOCK2Q92608 1830 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 A0A0B4J2E0 115 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 A0A0G2JK05 382 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 GLYATL1P3A0A0U1RQE8 302 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 A0A1B0GX12 115 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 A0A1W2PPK0 400 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 TCRBV7S2A1N4TA0A589 114 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 DHRS7CA6NNS2 312 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 MANBAO00462 879 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 OR7A17O14581 309 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 ENSAO43768 121 aaKnown RBP5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 TSPAN15O95858 294 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 TTLL1O95922 423 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 CD160O95971 181 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 OR13C7P0DN81 318 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 IL1RNP18510 177 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 RPL13AP40429 203 aaKnown RBP5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 TNFSF9P41273 254 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 OR10A3P58181 314 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 LILRA4P59901 499 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 TPI1P60174 286 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 SLC35B1P78383 322 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 CDKL1Q00532 357 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 EWSR1Q01844 656 aaKnown RBP eCLIP5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 BCL2L1Q07817 233 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 CDH18Q13634 790 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF74Q16587 644 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 CYBRD1Q53TN4 286 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 ANKRD16Q6P6B7 361 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF474Q6S9Z5 364 aaPredicted RBP5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 ENPP6Q6UWR7 440 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 TOMM20LQ6UXN7 152 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms