RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ACTG2P63267 376 aa16.94■□□□□ 0.3
APP-215ENST00000474136 PABPC1L2AQ5JQF8 200 aa16.94■□□□□ 0.3
APP-215ENST00000474136 SLC18B1Q6NT16 456 aa16.94■□□□□ 0.3
APP-215ENST00000474136 KCTD18Q6PI47 426 aaPredicted RBP16.94■□□□□ 0.3
APP-215ENST00000474136 TMPRSS11AQ6ZMR5 421 aa16.94■□□□□ 0.3
APP-215ENST00000474136 RHOUQ7L0Q8 258 aa16.94■□□□□ 0.3
APP-215ENST00000474136 KCTD20Q7Z5Y7 419 aa16.94■□□□□ 0.3
APP-215ENST00000474136 SYT9Q86SS6 491 aa16.94■□□□□ 0.3
APP-215ENST00000474136 OR10H4Q8NGA5 316 aa16.94■□□□□ 0.3
APP-215ENST00000474136 OR2AJ1Q8NGZ0 328 aa16.94■□□□□ 0.3
APP-215ENST00000474136 OTOSQ8NHW6 89 aa16.94■□□□□ 0.3
APP-215ENST00000474136 KLF14Q8TD94 323 aaPredicted RBP16.94■□□□□ 0.3
APP-215ENST00000474136 MRPS26Q9BYN8 205 aaKnown RBP16.94■□□□□ 0.3
APP-215ENST00000474136 OR2J1Q9GZK6 312 aa16.94■□□□□ 0.3
APP-215ENST00000474136 MSL2Q9HCI7 577 aa16.94■□□□□ 0.3
APP-215ENST00000474136 MRPL22Q9NWU5 206 aaKnown RBP16.94■□□□□ 0.3
APP-215ENST00000474136 LAMP5Q9UJQ1 280 aa16.94■□□□□ 0.3
APP-215ENST00000474136 POLR1DQ9Y2S0 133 aa16.94■□□□□ 0.3
APP-215ENST00000474136 SELENOFO60613 162 aa16.93■□□□□ 0.3
APP-215ENST00000474136 ADH4P08319 380 aa16.93■□□□□ 0.3
APP-215ENST00000474136 CST2P09228 141 aa16.93■□□□□ 0.3
APP-215ENST00000474136 CDAP32320 146 aa16.93■□□□□ 0.3
APP-215ENST00000474136 NAA10P41227 235 aaPredicted RBP16.93■□□□□ 0.3
APP-215ENST00000474136 PAX8Q06710 450 aa16.93■□□□□ 0.3
APP-215ENST00000474136 GALEQ14376 348 aa16.93■□□□□ 0.3
APP-215ENST00000474136 C17orf107Q6ZR85 190 aa16.93■□□□□ 0.3
APP-215ENST00000474136 DPY19L4Q7Z388 723 aa16.93■□□□□ 0.3
APP-215ENST00000474136 C1QL4Q86Z23 238 aa16.93■□□□□ 0.3
APP-215ENST00000474136 SPICQ8N5J4 248 aa16.93■□□□□ 0.3
APP-215ENST00000474136 HAVCR2Q8TDQ0 301 aa16.93■□□□□ 0.3
APP-215ENST00000474136 FCGR1BQ92637 280 aa16.93■□□□□ 0.3
APP-215ENST00000474136 DIRC2Q96SL1 478 aa16.93■□□□□ 0.3
APP-215ENST00000474136 TNFRSF19Q9NS68 423 aa16.93■□□□□ 0.3
APP-215ENST00000474136 TMEM106BQ9NUM4 274 aa16.93■□□□□ 0.3
APP-215ENST00000474136 ZNF281Q9Y2X9 895 aa16.93■□□□□ 0.3
APP-215ENST00000474136 LOC100509620A0A075B734 347 aa16.92■□□□□ 0.3
APP-215ENST00000474136 FAM181BA6NEQ2 426 aa16.92■□□□□ 0.3
APP-215ENST00000474136 TRIM64CA6NLI5 447 aa16.92■□□□□ 0.3
APP-215ENST00000474136 A8MXK9 166 aa16.92■□□□□ 0.3
APP-215ENST00000474136 MYL12BO14950 172 aa16.92■□□□□ 0.3
APP-215ENST00000474136 HOXA3O43365 443 aaPredicted RBP16.92■□□□□ 0.3
APP-215ENST00000474136 SPARCP09486 303 aa16.92■□□□□ 0.3
APP-215ENST00000474136 ALOX5APP20292 161 aa16.92■□□□□ 0.3
APP-215ENST00000474136 STOMP27105 288 aa16.92■□□□□ 0.3
APP-215ENST00000474136 C21orf33P30042 268 aaPredicted RBP16.92■□□□□ 0.3
APP-215ENST00000474136 TNFAIP6P98066 277 aaPredicted RBP16.92■□□□□ 0.3
APP-215ENST00000474136 AQP6Q13520 282 aa16.92■□□□□ 0.3
APP-215ENST00000474136 TBCEQ15813 527 aaPredicted RBP16.92■□□□□ 0.3
APP-215ENST00000474136 MBNL2Q5VZF2 373 aaKnown RBP16.92■□□□□ 0.3
APP-215ENST00000474136 PLEKHG7Q6ZR37 379 aa16.92■□□□□ 0.3
APP-215ENST00000474136 C9orf139Q6ZV77 190 aa16.92■□□□□ 0.3
APP-215ENST00000474136 RFPL4BQ6ZWI9 263 aa16.92■□□□□ 0.3
APP-215ENST00000474136 SPARTQ8N0X7 666 aa16.92■□□□□ 0.3
APP-215ENST00000474136 KLHL36Q8N4N3 616 aa16.92■□□□□ 0.3
APP-215ENST00000474136 GJC3Q8NFK1 279 aa16.92■□□□□ 0.3
APP-215ENST00000474136 NABP1Q96AH0 204 aa16.92■□□□□ 0.3
APP-215ENST00000474136 POM121L2Q96KW2 1035 aa16.92■□□□□ 0.3
APP-215ENST00000474136 CITED1Q99966 193 aa16.92■□□□□ 0.3
APP-215ENST00000474136 MND1Q9BWT6 205 aa16.92■□□□□ 0.3
APP-215ENST00000474136 MMP27Q9H306 513 aa16.92■□□□□ 0.3
APP-215ENST00000474136 ERVK13-1Q9NX77 482 aa16.92■□□□□ 0.3
APP-215ENST00000474136 CYB5R1Q9UHQ9 305 aa16.92■□□□□ 0.3
APP-215ENST00000474136 CAB39Q9Y376 341 aaPredicted RBP16.92■□□□□ 0.3
APP-215ENST00000474136 C5orf49A4QMS7 147 aa16.91■□□□□ 0.3
APP-215ENST00000474136 F5H0A9 414 aaPredicted RBP16.91■□□□□ 0.3
APP-215ENST00000474136 APOL3O95236 402 aa16.91■□□□□ 0.3
APP-215ENST00000474136 MT-ND2P03891 347 aa16.91■□□□□ 0.3
APP-215ENST00000474136 CD55P08174 381 aa16.91■□□□□ 0.3
APP-215ENST00000474136 KRTAP10-3P60369 221 aa16.91■□□□□ 0.3
APP-215ENST00000474136 RELBQ01201 579 aa16.91■□□□□ 0.3
APP-215ENST00000474136 EGR3Q06889 387 aa16.91■□□□□ 0.3
APP-215ENST00000474136 IRF3Q14653 427 aa16.91■□□□□ 0.3
APP-215ENST00000474136 ZMYND11Q15326 602 aa16.91■□□□□ 0.3
APP-215ENST00000474136 TMEM155Q4W5P6 130 aa16.91■□□□□ 0.3
APP-215ENST00000474136 BRICD5Q6PL45 260 aa16.91■□□□□ 0.3
APP-215ENST00000474136 DEGS2Q6QHC5 323 aa16.91■□□□□ 0.3
APP-215ENST00000474136 LRRC28Q86X40 367 aaPredicted RBP16.91■□□□□ 0.3
APP-215ENST00000474136 OR52N1Q8NH53 320 aa16.91■□□□□ 0.3
APP-215ENST00000474136 AKR7LQ8NHP1 331 aa16.91■□□□□ 0.3
APP-215ENST00000474136 THEM6Q8WUY1 208 aa16.91■□□□□ 0.3
APP-215ENST00000474136 EIF3KQ9UBQ5 218 aaKnown RBP16.91■□□□□ 0.3
APP-215ENST00000474136 OR5V1Q9UGF6 321 aa16.91■□□□□ 0.3
APP-215ENST00000474136 TANC2Q9HCD6 1990 aa16.9■□□□□ 0.3
APP-215ENST00000474136 TRAV40A0A0B4J280 105 aa16.9■□□□□ 0.3
APP-215ENST00000474136 A0A1W2PQL4 384 aaPredicted RBP16.9■□□□□ 0.3
APP-215ENST00000474136 SULT1C4O75897 302 aa16.9■□□□□ 0.3
APP-215ENST00000474136 PLATP00750 562 aa16.9■□□□□ 0.3
APP-215ENST00000474136 HTR1AP08908 422 aa16.9■□□□□ 0.3
APP-215ENST00000474136 ZNF32P17041 273 aa16.9■□□□□ 0.3
APP-215ENST00000474136 RAG2P55895 527 aa16.9■□□□□ 0.3
APP-215ENST00000474136 SCRN3Q0VDG4 424 aa16.9■□□□□ 0.3
APP-215ENST00000474136 MRPL28Q13084 256 aaKnown RBP16.9■□□□□ 0.3
APP-215ENST00000474136 MEP1BQ16820 701 aa16.9■□□□□ 0.3
APP-215ENST00000474136 LYPD4Q6UWN0 246 aa16.9■□□□□ 0.3
APP-215ENST00000474136 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.9■□□□□ 0.3
APP-215ENST00000474136 SYS1Q8N2H4 156 aa16.9■□□□□ 0.3
APP-215ENST00000474136 NANOGP1Q8N7R0 232 aa16.9■□□□□ 0.3
APP-215ENST00000474136 BEX1Q9HBH7 125 aa16.9■□□□□ 0.3
APP-215ENST00000474136 CYSLTR2Q9NS75 346 aa16.9■□□□□ 0.3
APP-215ENST00000474136 ZDHHC8Q9ULC8 765 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms