RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PRAMEF8Q5VWM4 474 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 MLIPQ5VWP3 458 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PRAMEF7Q5VXH5 474 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SLX4IPQ5VYV7 408 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TTC23Q5W5X9 447 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 LEMD1Q68G75 181 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TCEAL6Q6IPX3 200 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 REEP3Q6NUK4 255 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ACSM5Q6NUN0 579 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GUSBP11Q6P575 273 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TTC33Q6PID6 262 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 APOOLQ6UXV4 268 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF620Q6ZNG0 422 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 C16orf47Q6ZP98 133 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 LANCL3Q6ZV70 420 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 MBOAT2Q6ZWT7 520 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 AHSA2Q719I0 299 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ABHD13Q7L211 337 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PRSS42Q7Z5A4 293 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SNX29P2Q8IUI4 249 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 NKAIN4Q8IVV8 208 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 WDFY1Q8IWB7 410 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SLC30A8Q8IWU4 369 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 NRMQ8IXM6 262 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 C9orf40Q8IXQ3 194 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 KIR2DL5AQ8N109 375 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF619Q8N2I2 560 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR2L13Q8N349 312 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SLC25A45Q8N413 288 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 NATD1Q8N6N6 113 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TRIML2Q8N7C3 387 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TCEANCQ8N8B7 351 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF615Q8N8J6 731 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 COX18Q8N8Q8 333 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM105Q8N8V8 129 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 LRTM2Q8N967 370 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GATSQ8NAP1 163 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SYT14Q8NB59 555 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 FAM71CQ8NEG0 241 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF555Q8NEP9 628 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 BBS1Q8NFJ9 593 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 B3GNT7Q8NFL0 401 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR4F15Q8NGB8 312 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR4K5Q8NGD3 323 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR4K14Q8NGD5 310 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR52R1Q8NGF1 315 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR52I1Q8NGK6 324 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR13C2Q8NGS9 318 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR52P1PQ8NH57 321 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 FANK1Q8TC84 345 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GIPC3Q8TF64 312 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 METTL21AQ8WXB1 218 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GGHQ92820 318 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TCEAL3Q969E4 200 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CLDN23Q96B33 292 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SLC41A3Q96GZ6 507 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CNDP2Q96KP4 475 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OPALINQ96PE5 141 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TGM7Q96PF1 710 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR5M11Q96RB7 305 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 STACQ99469 402 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SDF2Q99470 211 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TSC22D3Q99576 134 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF649Q9BS31 505 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 COPS4Q9BT78 406 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF426Q9BUY5 554 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 FUNDC2Q9BWH2 189 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 FAIM2Q9BWQ8 316 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GTPBP2Q9BX10 602 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TAPBPLQ9BX59 468 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TSSK6Q9BXA6 273 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 HCAR1Q9BXC0 346 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PINK1Q9BXM7 581 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PRRG4Q9BZD6 226 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OCR1Q9BZK8 76 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SLIRPQ9GZT3 109 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CHRNA10Q9GZZ6 450 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ING2Q9H160 280 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR51E2Q9H255 320 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 LRRN3Q9H3W5 708 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 FN3KQ9H479 309 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PIGUQ9H490 435 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ARMC7Q9H6L4 198 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 UCK1Q9HA47 277 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CXorf21Q9HAI6 301 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 FOLH1BQ9HBA9 442 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SLC25A19Q9HC21 320 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 LYRM4Q9HD34 91 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 APMAPQ9HDC9 416 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 AMBNQ9NP70 447 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 RAB9BQ9NP90 201 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ADAP2Q9NPF8 381 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ACOT13Q9NPJ3 140 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 MEPEQ9NQ76 525 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GSN-AS1Q9NRJ2 163 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SOHLH2Q9NX45 425 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 AHSPQ9NZD4 102 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CNIH4Q9P003 139 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 DHCR7Q9UBM7 475 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CTSFQ9UBX1 484 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms