RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 SPNP16150 400 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 TNFSF4P23510 183 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ZFP36P26651 326 aaKnown RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 PCGF2P35227 344 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 NUP62P37198 522 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 MTNR1AP48039 350 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 GDI2P50395 445 aaKnown RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 MMP15P51511 669 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 RRAS2P62070 204 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF154Q13106 437 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 SCARB2Q14108 478 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 DGCR6Q14129 220 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF74Q16587 644 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 AANATQ16613 207 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 PABPC1L2AQ5JQF8 200 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 THEM4Q5T1C6 240 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 DDI2Q5TDH0 399 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ELP2Q6IA86 826 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ERICH5Q6P6B1 374 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF613Q6PF04 617 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 LRFN4Q6PJG9 635 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ARL9Q6T311 187 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 TEX261Q6UWH6 196 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 NHLRC1Q6VVB1 395 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 NRARPQ7Z6K4 114 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ZBTB46Q86UZ6 589 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 COMTD1Q86VU5 262 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 CDH26Q8IXH8 852 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 TIGD4Q8IY51 512 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 C1orf174Q8IYL3 243 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 OR8H3Q8N146 312 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 SPICQ8N5J4 248 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 YIPF7Q8N8F6 280 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 SYT14Q8NB59 555 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 DUSP18Q8NEJ0 188 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 OR9I1Q8NGQ6 314 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 GEMIN6Q8WXD5 167 aaKnown RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 GTF3AQ92664 365 aaKnown RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 RBPMSQ93062 196 aaKnown RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 MCHR2Q969V1 340 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ERMAPQ96PL5 475 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 DIRC2Q96SL1 478 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 MBOAT4Q96T53 435 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 SEPHS2Q99611 448 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 MCHR1Q99705 422 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 TCEAL7Q9BRU2 100 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 MND1Q9BWT6 205 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 CDADC1Q9BWV3 514 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 C1QTNF5Q9BXJ0 243 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 SMURF1Q9HCE7 757 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 RANGRFQ9HD47 186 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 TAS2R5Q9NYW4 299 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 CNOT2Q9NZN8 540 aaKnown RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 COPZ2Q9P299 210 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ERVK-18Q9QC07 812 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF69Q9UC07 566 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 CGGBP1Q9UFW8 167 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 RPS6KA6Q9UK32 745 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 SAMD4AQ9UPU9 718 aaKnown RBP5.85□□□□□ -1.47
CKS1B-205ENST00000473344 CORO2BQ9UQ03 480 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 NPTNQ9Y639 398 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 U3KQ87 197 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 TGP01266 2768 aa5.85□□□□□ -1.47
CKS1B-205ENST00000473344 NUP214P35658 2090 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 FAM240BA0A1B0GVZ2 78 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 CPSF4LA6NMK7 179 aaKnown RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 M0R3H8 397 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 WRBO00258 174 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 TIMM8AO60220 97 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 TPST2O60704 377 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 PTP4A3O75365 173 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 FADS2O95864 444 aaKnown RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 SERPINA1P01009 418 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 IGHMP01871 453 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 MT-ND2P03891 347 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 TNFRSF1AP19438 455 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 SDC2P34741 201 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 GUCA1AP43080 201 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 DAP3P51398 398 aaKnown RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 LSM3P62310 102 aaKnown RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 TNFAIP6P98066 277 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 CD83Q01151 205 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 FAM76BQ5HYJ3 339 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 ENTPD8Q5MY95 495 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 MBNL2Q5VZF2 373 aaKnown RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 MZT2AQ6P582 158 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 LEG1Q6P5S2 330 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 BTNL3Q6UXE8 466 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 C17orf107Q6ZR85 190 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 ZER1Q7Z7L7 766 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF101Q8IZC7 436 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 BCL6BQ8N143 479 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 CLDN22Q8N7P3 220 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF680Q8NEM1 530 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 DEFB108BQ8NET1 73 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 NOXO1Q8NFA2 376 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 ABHD4Q8TB40 342 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 SLC25A40Q8TBP6 338 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 TEX47Q8TBZ9 253 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms