RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 FHL1Q13642 323 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 TOMM34Q15785 309 aaPredicted RBP8.98□□□□□ -0.97
APTX-216ENST00000472896 ZIC1Q15915 447 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 GUK1Q16774 197 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 DEFB109BQ30KR1 87 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 ACTBL2Q562R1 376 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 MRPL2Q5T653 305 aaKnown RBP8.98□□□□□ -0.97
APTX-216ENST00000472896 ATP1A1-AS1Q5TC04 95 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 TMEM268Q5VZI3 342 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 OPN5Q6U736 354 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 CLEC9AQ6UXN8 241 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 ZNF793Q6ZN11 406 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 Q6ZRG5 221 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 KCTD9Q7L273 389 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 DPPA2Q7Z7J5 298 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 ZNF676Q8N7Q3 588 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 LMNTD1Q8N9Z9 388 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 NPEPL1Q8NDH3 523 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 M1APQ8TC57 530 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 MISP3Q96FF7 219 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 CCDC74BQ96LY2 380 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 Q96M85 177 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 ADAD1Q96M93 576 aaKnown RBP8.98□□□□□ -0.97
APTX-216ENST00000472896 WDR92Q96MX6 357 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 ZNF681Q96N22 645 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 IL17FQ96PD4 163 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 SDF2Q99470 211 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 SPRY4Q9C004 299 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 OR52A5Q9H2C5 316 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 C19orf12Q9NSK7 152 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 OCIAD1Q9NX40 245 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 HDGFL3Q9Y3E1 203 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 ITPR2Q14571 2701 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 NBPF19A0A087WUL8 3843 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 A0A087WUJ7 227 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 A0A0B4J2E0 115 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 LOC101059948A0A1B0GTJ6 334 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 A0A1B0GX12 115 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 FEZF1A0PJY2 475 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 UMAD1C9J7I0 102 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 H0YIZ8 118 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 DCTN6O00399 190 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 STK17BO94768 372 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 ABHD16AO95870 558 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 ERCC1P07992 297 aaPredicted RBP8.97□□□□□ -0.97
APTX-216ENST00000472896 PTNP21246 168 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 HIST1H1TP22492 207 aaPredicted RBP8.97□□□□□ -0.97
APTX-216ENST00000472896 COL8A1P27658 744 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 CHATP28329 748 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 CRABP1P29762 137 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 LSM6P62312 80 aaKnown RBP8.97□□□□□ -0.97
APTX-216ENST00000472896 DUSP2Q05923 314 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 EGR3Q06889 387 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 GAMTQ14353 236 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 SURF2Q15527 256 aaPredicted RBP8.97□□□□□ -0.97
APTX-216ENST00000472896 ZNF787Q6DD87 383 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 FDX2Q6P4F2 183 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 ZNF627Q7L945 461 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 TIPARPQ7Z3E1 657 aaKnown RBP8.97□□□□□ -0.97
APTX-216ENST00000472896 TGIF2LXQ8IUE1 241 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 HIST3H2BBQ8N257 126 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 OR9A2Q8NGT5 310 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 OR2L2Q8NH16 312 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 TERB2Q8NHR7 220 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 TMEM106AQ96A25 262 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 NDUFAF3Q9BU61 184 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 FGF22Q9HCT0 170 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 PDE7BQ9NP56 450 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 ADAP2Q9NPF8 381 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 KCNJ16Q9NPI9 418 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 OR2S2Q9NQN1 319 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 FAM212BQ9NTI7 297 aaPredicted RBP8.97□□□□□ -0.97
APTX-216ENST00000472896 SLC23A2Q9UGH3 650 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 MRM2Q9UI43 246 aaKnown RBP8.97□□□□□ -0.97
APTX-216ENST00000472896 SRPK3Q9UPE1 567 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 MEMO1Q9Y316 297 aa8.97□□□□□ -0.97
APTX-216ENST00000472896 A0A087WWC5 75 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 A0A1W2PPE2 198 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 OR5H15A6NDH6 313 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 OR5H1A6NKK0 313 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 ZNF724A8MTY0 619 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 RAB27BO00194 218 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 SMAD9O15198 467 aaKnown RBP8.96□□□□□ -0.97
APTX-216ENST00000472896 AGFG2O95081 481 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 SERPINA5P05154 406 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 PCCBP05166 539 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 OR8G3PP0DMU2 310 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 ZNF28P17035 718 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 RAB6AP20340 208 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 FGF7P21781 194 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 VAMP1P23763 118 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 SUCLG1P53597 346 aaKnown RBP8.96□□□□□ -0.97
APTX-216ENST00000472896 RPS23P62266 143 aaKnown RBP8.96□□□□□ -0.97
APTX-216ENST00000472896 NKX6-1P78426 367 aaPredicted RBP8.96□□□□□ -0.97
APTX-216ENST00000472896 PMPCAQ10713 525 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 KLRB1Q12918 225 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 CLINT1Q14677 625 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 MOGAT2Q3SYC2 334 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 MESTQ5EB52 335 aa8.96□□□□□ -0.97
APTX-216ENST00000472896 MDGA2Q7Z553 956 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms