RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 SLC35D3Q5M8T2 416 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 TEX36Q5VZQ5 186 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 WDR82Q6UXN9 313 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 BRD3OSQ6XYD6 125 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.49□□□□□ -1.21
USF1-204ENST00000472217 C11orf53Q8IXP5 236 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 C3orf56Q8N813 242 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 CSNK2A3Q8NEV1 391 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 OR1M1Q8NGA1 313 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 LRRC29Q8WV35 223 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 DNAJC9Q8WXX5 260 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 ITPKCQ96DU7 683 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 LYZL4Q96KX0 146 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 PAPOLGQ9BWT3 736 aaKnown RBP7.49□□□□□ -1.21
USF1-204ENST00000472217 CADM1Q9BY67 442 aaKnown RBP7.49□□□□□ -1.21
USF1-204ENST00000472217 RASSF4Q9H2L5 321 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 RGCCQ9H4X1 137 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 ZMAT3Q9HA38 289 aaKnown RBP7.49□□□□□ -1.21
USF1-204ENST00000472217 RNPEPL1Q9HAU8 725 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 KIF17Q9P2E2 1029 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 LRP12Q9Y561 859 aa7.49□□□□□ -1.21
USF1-204ENST00000472217 TENM1Q9UKZ4 2725 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 MDFIC2A0A1B0GVS7 189 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 CCDC182A6NF36 153 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 ANXA2P2A6NMY6 339 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 ZNF879B4DU55 563 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.48□□□□□ -1.21
USF1-204ENST00000472217 TMPRSS2O15393 492 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 SFTPBP07988 381 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 RNASE1P07998 156 aaKnown RBP7.48□□□□□ -1.21
USF1-204ENST00000472217 MRPL3P09001 348 aaKnown RBP7.48□□□□□ -1.21
USF1-204ENST00000472217 HKR1P10072 659 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 MMP9P14780 707 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 ALOX5APP20292 161 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 MTNR1AP48039 350 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 DAPP51397 102 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 CRISP1P54107 249 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 PSMA6P60900 246 aaKnown RBP7.48□□□□□ -1.21
USF1-204ENST00000472217 ELF3P78545 371 aaPredicted RBP7.48□□□□□ -1.21
USF1-204ENST00000472217 IL5RAQ01344 420 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 PRDX4Q13162 271 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 SNCBQ16143 134 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 SNAPC1Q16533 368 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 GPR157Q5UAW9 335 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 CD276Q5ZPR3 534 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 FAHD1Q6P587 224 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 GALNT4Q8N4A0 578 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 FTMTQ8N4E7 242 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 OR8B12Q8NGG6 310 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 UTP4Q969X6 686 aaKnown RBP7.48□□□□□ -1.21
USF1-204ENST00000472217 SEH1LQ96EE3 360 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 TEAD3Q99594 435 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 TEX12Q9BXU0 123 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 TLNRD1Q9H1K6 362 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 NIPAL2Q9H841 368 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 PAPOLBQ9NRJ5 636 aaKnown RBP7.48□□□□□ -1.21
USF1-204ENST00000472217 TVP23BQ9NYZ1 205 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 KAAG1Q9UBP8 84 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 LAMP5Q9UJQ1 280 aa7.48□□□□□ -1.21
USF1-204ENST00000472217 A0A1B0GW55 424 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 ZNF850A8MQ14 1090 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 PRR32B1ATL7 298 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 SRRM5B3KS81 715 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 CLDN34H7C241 214 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 M0R129 80 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 PSMD9O00233 223 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 DVL1O14640 695 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 CDIPTO14735 213 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 TOX4O94842 621 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 LIPFP07098 398 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 DUX4L2P0CJ85 424 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 DUX4L3P0CJ86 424 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 DUX4L4P0CJ87 422 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 DUX4L5P0CJ88 424 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 DUX4L6P0CJ89 424 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 DUX4L7P0CJ90 424 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 MUC1P15941 1255 aaPredicted RBP7.47□□□□□ -1.21
USF1-204ENST00000472217 CFHR2P36980 270 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 BNIP1Q12981 228 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 PTGES3Q15185 160 aaKnown RBP7.47□□□□□ -1.21
USF1-204ENST00000472217 SLC9A3R2Q15599 337 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 MICBQ29980 383 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 DEFB112Q30KQ8 113 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 WDR38Q5JTN6 314 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
USF1-204ENST00000472217 LCN1P1Q5VSP4 162 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 RUSC1-AS1Q66K80 236 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 KCTD18Q6PI47 426 aaPredicted RBP7.47□□□□□ -1.21
USF1-204ENST00000472217 DUX4L9Q6RFH8 374 aaPredicted RBP7.47□□□□□ -1.21
USF1-204ENST00000472217 BTN2A1Q7KYR7 527 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 BCDIN3DQ7Z5W3 292 aaKnown RBP7.47□□□□□ -1.21
USF1-204ENST00000472217 KRT77Q7Z794 578 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 FGFRL1Q8N441 504 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 PNLDC1Q8NA58 520 aaKnown RBP7.47□□□□□ -1.21
USF1-204ENST00000472217 OR5K1Q8NHB7 308 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 HPSE2Q8WWQ2 592 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 OR5P3Q8WZ94 311 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 ST8SIA4Q92187 359 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 SLC25A28Q96A46 364 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 NRBF2Q96F24 287 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms