RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ELF3P78545 371 aaPredicted RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 MRPS11P82912 194 aaKnown RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 RPL19P84098 196 aaKnown RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 VLDLRP98155 873 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 DEFA6Q01524 100 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 OGDHQ02218 1023 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 AESQ08117 197 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 RAB31Q13636 194 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 IRF4Q15306 451 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 NDUFA9Q16795 377 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 PGGHGQ32M88 737 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 RFX4Q33E94 735 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 LINC01620Q4KN68 170 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 ACSM3Q53FZ2 586 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 CYBRD1Q53TN4 286 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 OGFRL1Q5TC84 451 aaPredicted RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 SDHAF4Q5VUM1 108 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 SLX4IPQ5VYV7 408 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 FAHD2BQ6P2I3 314 aaPredicted RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 PNCKQ6P2M8 343 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 SPESP1Q6UW49 350 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 ZNF621Q6ZSS3 439 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 SSX7Q7RTT5 188 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 SLC16A14Q7RTX9 510 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 TRAPPC5Q8IUR0 188 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 APRG1Q8IVJ8 170 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 C2orf73Q8N5S3 287 aaPredicted RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 TMEM251Q8N6I4 163 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 HSD17B11Q8NBQ5 300 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 OR5L1Q8NGL2 311 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 OR5AK3PQ8NH89 298 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 SMIM12Q96EX1 92 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 MRPL48Q96GC5 212 aaKnown RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 FAHD2AQ96GK7 314 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 AMDHD1Q96NU7 426 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 HOPXQ9BPY8 73 aaPredicted RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 TCEAL7Q9BRU2 100 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 FEM1AQ9BSK4 669 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 MRPS26Q9BYN8 205 aaKnown RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 TLNRD1Q9H1K6 362 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 RHOFQ9HBH0 211 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 SH2D2AQ9NP31 389 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 PRSS16Q9NQE7 514 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 POLE4Q9NR33 117 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 SDHAF2Q9NX18 166 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 DUS2Q9NX74 493 aaKnown RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 MAT2BQ9NZL9 334 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 RWDD2AQ9UIY3 292 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 NPIPA1Q9UND3 350 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 EXOSC1Q9Y3B2 195 aaKnown RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 A2MP01023 1474 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 NAV1Q8NEY1 1877 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 YLPM1P49750 1951 aaKnown RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 PCF11O94913 1555 aaKnown RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 C9orf84Q5VXU9 1444 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 SMG6Q86US8 1419 aaKnown RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 RIMS2Q9UQ26 1411 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 MTCL1Q9Y4B5 1905 aaKnown RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 A0A1B0GV90 55 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 A0A1W2PRF3 423 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 A0A1W2PRM7 423 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 PRSS37A4D1T9 235 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 NKX2-6A6NCS4 301 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 VSTM2BA6NLU5 285 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 HIDE1A8MVS5 230 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 TSTD3H0UI37 97 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 H0Y980 276 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 M0R3G1 203 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 DFFAO00273 331 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 PRMT5O14744 637 aaPredicted RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 SLC31A1O15431 190 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 AIREO43918 545 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 EFNA2O43921 213 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 HSBP1O75506 76 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 SC5DO75845 299 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 SULT1C4O75897 302 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 FARS2O95363 451 aaKnown RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 TNFAIP8O95379 198 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 UTS2O95399 124 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 TSPAN13O95857 204 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 IFNA10P01566 189 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 IFNGP01579 166 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 S100A8P05109 93 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 HLA-GP17693 338 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 RCC1P18754 421 aaPredicted RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 TBPP20226 339 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 TBXA2RP21731 343 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 ELK4P28324 431 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 GABRR2P28476 465 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 GNRHRP30968 328 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 CCR7P32248 378 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 CA5AP35218 305 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 DNASE1L1P49184 302 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 TAS2R39P59534 338 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 RAP1BP61224 184 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 HPCAP84074 193 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 FAM3AP98173 230 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 KLRC3Q07444 240 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 EXOSC2Q13868 293 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms