RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 KLF3P57682 345 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-203ENST00000471658 TIMM50Q3ZCQ8 353 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 DVL3Q92997 716 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-203ENST00000471658 PLCE1Q9P212 2302 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 GPR160Q9UJ42 338 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 ICE1Q9Y2F5 2266 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 ABCA4P78363 2273 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 GCN1Q92616 2671 aaKnown RBP16.4■□□□□ 0.22
PSPC1-203ENST00000471658 ZNF816-ZNF321PA0A0X1KG74 233 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 FAM221AA4D161 298 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 DHRS7CA6NNS2 312 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 ZNF850A8MQ14 1090 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 CA6P23280 308 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 MAPK3P27361 379 aaPredicted RBP16.4■□□□□ 0.22
PSPC1-203ENST00000471658 APOBEC3AP31941 199 aaPredicted RBP16.4■□□□□ 0.22
PSPC1-203ENST00000471658 DDOSTP39656 456 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 UBE2V2Q15819 145 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 HSD17B12Q53GQ0 312 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 GDPGP1Q6ZNW5 385 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 Q6ZR03 302 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 SERPINA12Q8IW75 414 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 OR51A2Q8NGJ7 313 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 OR13C9Q8NGT0 318 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 ISOC1Q96CN7 298 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 DHRS9Q9BPW9 319 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 PLK3Q9H4B4 646 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 TAAR3PQ9P1P4 343 aa16.4■□□□□ 0.22
PSPC1-203ENST00000471658 HRNRQ86YZ3 2850 aaPredicted RBP16.39■□□□□ 0.21
PSPC1-203ENST00000471658 USP9YO00507 2555 aaPredicted RBP16.39■□□□□ 0.21
PSPC1-203ENST00000471658 H0YL77 283 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 GMDSO60547 372 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 SELEP16581 610 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 IGFBP3P17936 291 aaPredicted RBP16.39■□□□□ 0.21
PSPC1-203ENST00000471658 SERPINF1P36955 418 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 TMBIM6P55061 237 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 CEP78Q5JTW2 689 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 TMEM42Q69YG0 159 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 HIST2H2BCQ6DN03 193 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 PAMR1Q6UXH9 720 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 MOB3CQ70IA8 216 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 CSNK2A3Q8NEV1 391 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 OR8G5Q8NG78 346 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 NPRL2Q8WTW4 380 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 SLC30A2Q9BRI3 323 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 PAPOLGQ9BWT3 736 aaKnown RBP16.39■□□□□ 0.21
PSPC1-203ENST00000471658 ZCCHC4Q9H5U6 513 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 MSL2Q9HCI7 577 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 GSTK1Q9Y2Q3 226 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 PKDREJQ9NTG1 2253 aa16.39■□□□□ 0.21
PSPC1-203ENST00000471658 IGKV1-9A0A0C4DH69 117 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 A0A1W2PPW3 197 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 SMIM30A4D0T7 59 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 ANKRD30BLA7E2S9 258 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 CTAG2O75638 210 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 CST4P01036 141 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 NRASP01111 189 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 RAF1P04049 648 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 CLEC2LP0C7M8 214 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 SRMP19623 302 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 ALDH3B1P43353 468 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 MMP15P51511 669 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 PRDX4Q13162 271 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 MST1LQ2TV78 715 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 CLVS2Q5SYC1 327 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 RNF144BQ7Z419 303 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 OR5D14Q8NGL3 314 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 UBASH3BQ8TF42 649 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 C10orf35Q96D05 121 aa16.38■□□□□ 0.21
PSPC1-203ENST00000471658 NKX3-1Q99801 234 aaPredicted RBP16.38■□□□□ 0.21
PSPC1-203ENST00000471658 FGF23Q9GZV9 251 aaPredicted RBP16.38■□□□□ 0.21
PSPC1-203ENST00000471658 SMIM31A0A1B0GVY4 71 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 H3BMQ9 156 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 ARL6IP5O75915 188 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 MAS1P04201 325 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 ADRA2CP18825 462 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 SELENOVP59797 346 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 SPCS2Q15005 226 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 ZBTB37Q5TC79 503 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 ZNF529Q6P280 563 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 KRT74Q7RTS7 529 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 ZNF295-AS1Q8N0V1 137 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 OR1M1Q8NGA1 313 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 RAB2BQ8WUD1 216 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 PHYHIPQ92561 330 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 C12orf43Q96C57 262 aaKnown RBP16.37■□□□□ 0.21
PSPC1-203ENST00000471658 KCTD7Q96MP8 289 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 CHST5Q9GZS9 411 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 TMEM100Q9NV29 134 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 MRPL15Q9P015 296 aaKnown RBP16.37■□□□□ 0.21
PSPC1-203ENST00000471658 PLEKHB1Q9UF11 243 aaPredicted RBP16.37■□□□□ 0.21
PSPC1-203ENST00000471658 VSTM5A8MXK1 200 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 HS3ST1O14792 307 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 MLNRO43193 412 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 CDRT1O95170 752 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 ATF1P18846 271 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 SDC2P34741 201 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 MXD1Q05195 221 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 LRRTM1Q86UE6 522 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 DNAAF1Q8NEP3 725 aa16.37■□□□□ 0.21
PSPC1-203ENST00000471658 NDNFQ8TB73 568 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms