RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 RIPPLY1Q0D2K3 151 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 SMN1Q16637 294 aaKnown RBP12.89□□□□□ -0.35
SDC3-203ENST00000471567 TP53I3Q53FA7 332 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 AVPI1Q5T686 147 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 FDX2Q6P4F2 183 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 Q6ZSR3 168 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 MOGAT3Q86VF5 341 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 COMMD2Q86X83 199 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 C1orf87Q8N0U7 546 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 SYS1Q8N2H4 156 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 SEMA6DQ8NFY4 1073 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 OR52I1Q8NGK6 324 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 OR11L1Q8NGX0 322 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 OR8S1Q8NH09 359 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 CNIH3Q8TBE1 160 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 SOX7Q9BT81 388 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 PAPOLGQ9BWT3 736 aaKnown RBP12.89□□□□□ -0.35
SDC3-203ENST00000471567 JAM3Q9BX67 310 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 FN3KRPQ9HA64 309 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 FGF20Q9NP95 211 aaPredicted RBP12.89□□□□□ -0.35
SDC3-203ENST00000471567 MYRFQ9Y2G1 1151 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 ZANQ9Y493 2812 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 TLN2Q9Y4G6 2542 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 ZNF816-ZNF321PA0A0X1KG74 233 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 LOC100289279A0A1B0GTE1 492 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 ANXA2P2A6NMY6 339 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 DHRS7CA6NNS2 312 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 WNT9BO14905 357 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 DHRS3O75911 302 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 IGHV2-70P01814 119 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 DCKP27707 260 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 PMELP40967 661 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 OR12D2P58182 307 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 LMO4P61968 165 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 THAP5Q7Z6K1 395 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 LHFPL3Q86UP9 236 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 CCDC54Q8NEL0 328 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 ZNF420Q8TAQ5 688 aaPredicted RBP12.88□□□□□ -0.35
SDC3-203ENST00000471567 FBLIM1Q8WUP2 373 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 FAM71F1Q96KD3 344 aaPredicted RBP12.88□□□□□ -0.35
SDC3-203ENST00000471567 MICU1Q9BPX6 476 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 ZNF649Q9BS31 505 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 ALG8Q9BVK2 526 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 ACOXLQ9NUZ1 547 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 ERVK13-1Q9NX77 482 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 DCAF16Q9NXF7 216 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 SLC22A13Q9Y226 551 aa12.88□□□□□ -0.35
SDC3-203ENST00000471567 HIVEP2P31629 2446 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 IGHV3-64DA0A0J9YX35 117 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 A0A1B0GTI1 187 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 ZNF850A8MQ14 1090 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 GNAO1P09471 354 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 IRF2P14316 349 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 CCL1P22362 96 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 IL2RGP31785 369 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 BTG1P62324 171 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 MRPL28Q13084 256 aaKnown RBP12.87□□□□□ -0.35
SDC3-203ENST00000471567 PRDX4Q13162 271 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 TMEM155Q4W5P6 130 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 PRAMEF6Q5VXH4 476 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 Q71RC1 249 aaPredicted RBP12.87□□□□□ -0.35
SDC3-203ENST00000471567 DOK3Q7L591 496 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 LRRC28Q86X40 367 aaPredicted RBP12.87□□□□□ -0.35
SDC3-203ENST00000471567 LINC01356Q8N9X3 169 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 HAVCR2Q8TDQ0 301 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 PIGCQ92535 297 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 DVL3Q92997 716 aaPredicted RBP12.87□□□□□ -0.35
SDC3-203ENST00000471567 RNF166Q96A37 237 aaPredicted RBP12.87□□□□□ -0.35
SDC3-203ENST00000471567 RAB39BQ96DA2 213 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 MSI2Q96DH6 328 aaKnown RBP12.87□□□□□ -0.35
SDC3-203ENST00000471567 ITPKCQ96DU7 683 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 HIST1H2AAQ96QV6 131 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 RTL8AQ9BWD3 113 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 NARFLQ9H6Q4 476 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 ENPP5Q9UJA9 477 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 V9GYS6 101 aa12.87□□□□□ -0.35
SDC3-203ENST00000471567 A0A1B0GVI7 797 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 ISPDA4D126 451 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 J3QLW9 94 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 P2RY10O00398 339 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 HTR1AP08908 422 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 ZNF19P17023 458 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 CPT2P23786 658 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 PSMB10P40306 273 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 MDH2P40926 338 aaKnown RBP12.86□□□□□ -0.35
SDC3-203ENST00000471567 CCR9P51686 369 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 AQP4P55087 323 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 CDH15P55291 814 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 MPPED2Q15777 294 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 WDR38Q5JTN6 314 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 C6orf52Q5T4I8 152 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 ZDHHC23Q8IYP9 409 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 MUC20Q8N307 709 aaPredicted RBP12.86□□□□□ -0.35
SDC3-203ENST00000471567 PRSS35Q8N3Z0 413 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 SPICQ8N5J4 248 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 OR14K1Q8NGZ2 314 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 OR2G2Q8NGZ5 317 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 OR5P3Q8WZ94 311 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 PELI1Q96FA3 418 aa12.86□□□□□ -0.35
SDC3-203ENST00000471567 C4orf36Q96KX1 117 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms