RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 PHYHIPQ92561 330 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 GTF3AQ92664 365 aaKnown RBP9.61□□□□□ -0.87
SREBF1-209ENST00000470247 C10orf35Q96D05 121 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 SYT3Q9BQG1 590 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 SLC30A2Q9BRI3 323 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 CHCHD6Q9BRQ6 235 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 PLEKHF2Q9H8W4 249 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 TXNL4BQ9NX01 149 aaKnown RBP9.61□□□□□ -0.87
SREBF1-209ENST00000470247 PLEKHB1Q9UF11 243 aaPredicted RBP9.61□□□□□ -0.87
SREBF1-209ENST00000470247 DUSP13Q9UII6 198 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 DHDHQ9UQ10 334 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 AKAP6Q13023 2319 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 ARFGEF3Q5TH69 2177 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 TRAV8-7A0A075B6U6 113 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 ZNF816-ZNF321PA0A0X1KG74 233 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 A6NHS1 94 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 HS3ST1O14792 307 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 AIREO43918 545 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 GMDSO60547 372 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 ALX3O95076 343 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 CD8AP01732 235 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 DANCRP0C864 163 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 CD37P11049 281 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 SELEP16581 610 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 TGFBR1P36897 503 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 EVX1P49640 407 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 KLF3P57682 345 aaPredicted RBP9.6□□□□□ -0.87
SREBF1-209ENST00000470247 UBE2V2Q15819 145 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 DMRTC1Q5HYR2 192 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 FOXB2Q5VYV0 432 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 HIST2H2BCQ6DN03 193 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 C22orf42Q6IC83 251 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 CRIP3Q6Q6R5 217 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 GDPGP1Q6ZNW5 385 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 UTS2BQ765I0 119 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 CLVS1Q8IUQ0 354 aaPredicted RBP9.6□□□□□ -0.87
SREBF1-209ENST00000470247 BHLHE23Q8NDY6 225 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 CSNK2A3Q8NEV1 391 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 OR8G5Q8NG78 346 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 OR51A2Q8NGJ7 313 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 TSEN15Q8WW01 171 aaKnown RBP9.6□□□□□ -0.87
SREBF1-209ENST00000470247 PIGTQ969N2 578 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 CHST5Q9GZS9 411 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 PLK3Q9H4B4 646 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 MRPL15Q9P015 296 aaKnown RBP9.6□□□□□ -0.87
SREBF1-209ENST00000470247 TAAR3PQ9P1P4 343 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 SSR3Q9UNL2 185 aa9.6□□□□□ -0.87
SREBF1-209ENST00000470247 RAI1Q7Z5J4 1906 aaPredicted RBP9.59□□□□□ -0.87
SREBF1-209ENST00000470247 ZSCAN5BA6NJL1 495 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 ZNF850A8MQ14 1090 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 H0YL77 283 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 MLNRO43193 412 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 TIMM8AO60220 97 aaPredicted RBP9.59□□□□□ -0.87
SREBF1-209ENST00000470247 SOD3P08294 240 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 ADRA2CP18825 462 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 FSTP19883 344 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 CA6P23280 308 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 ALDH3B1P43353 468 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 NCS1P62166 190 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 TLE4Q04727 773 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 CEP78Q5JTW2 689 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 CLVS2Q5SYC1 327 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 C11orf71Q6IPW1 123 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 RNF144BQ7Z419 303 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 LRRTM1Q86UE6 522 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 DTX2Q86UW9 622 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 LYPD6Q86Y78 171 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 SERPINA12Q8IW75 414 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 ZNF611Q8N823 705 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 HPSE2Q8WWQ2 592 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 IGFBPL1Q8WX77 278 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 PIGCQ92535 297 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 C14orf79Q96F83 325 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 GFI1Q99684 422 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 ZCCHC4Q9H5U6 513 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 MSL2Q9HCI7 577 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 EXOSC4Q9NPD3 245 aaKnown RBP9.59□□□□□ -0.87
SREBF1-209ENST00000470247 GPR173Q9NS66 373 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 TAS2R4Q9NYW5 299 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 GPR160Q9UJ42 338 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 FOXJ3Q9UPW0 622 aa9.59□□□□□ -0.87
SREBF1-209ENST00000470247 TRAV1-2A0A0B4J238 106 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 LOC100506127A0A0U1RQW1 187 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 VSTM5A8MXK1 200 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 B9A039 149 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 NRASP01111 189 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 CD2P06729 351 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 PRF1P14222 555 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 ATF1P18846 271 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 SRMP19623 302 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 MAPK3P27361 379 aaPredicted RBP9.58□□□□□ -0.88
SREBF1-209ENST00000470247 TMBIM6P55061 237 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 VBP1P61758 197 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 LSM3P62310 102 aaKnown RBP9.58□□□□□ -0.88
SREBF1-209ENST00000470247 PRDX4Q13162 271 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 TIMM50Q3ZCQ8 353 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 HSD17B12Q53GQ0 312 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 SPRNQ5BIV9 151 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 PAMR1Q6UXH9 720 aa9.58□□□□□ -0.88
SREBF1-209ENST00000470247 NR2C2APQ86WQ0 139 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms