RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TRIQKQ629K1 86 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 FRMPD2BQ6IN97 320 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 FAM131AQ6UXB0 335 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 PLA2G4DQ86XP0 818 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 CALHM1Q8IU99 346 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 WDFY1Q8IWB7 410 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 VKORC1L1Q8N0U8 176 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 PDIK1LQ8N165 341 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 LRRC52Q8N7C0 313 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 ZNF740Q8NDX6 193 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 DUSP18Q8NEJ0 188 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 OR10Z1Q8NGY1 313 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 OR51F2Q8NH61 342 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 OR2V1Q8NHB1 315 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 SFXN5Q8TD22 340 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 MCOLN3Q8TDD5 553 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 PYROXD1Q8WU10 500 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 NDRG1Q92597 394 aaKnown RBP3.09□□□□□ -1.91
COL11A1-208ENST00000470170 DNAJA3Q96EY1 480 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 BCL2L14Q9BZR8 327 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 NAT10Q9H0A0 1025 aaKnown RBP3.09□□□□□ -1.91
COL11A1-208ENST00000470170 GLIPR2Q9H4G4 154 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 TRABDQ9H4I3 376 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 CAB39LQ9H9S4 337 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 RDH14Q9HBH5 336 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 EXOSC3Q9NQT5 275 aaKnown RBP3.09□□□□□ -1.91
COL11A1-208ENST00000470170 FBXO6Q9NRD1 293 aaPredicted RBP3.09□□□□□ -1.91
COL11A1-208ENST00000470170 PARVAQ9NVD7 372 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 ASF1AQ9Y294 204 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 RPL36Q9Y3U8 105 aaKnown RBP3.09□□□□□ -1.91
COL11A1-208ENST00000470170 HECW2Q9P2P5 1572 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 RIMBP3CA6NJZ7 1639 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 RIMBP3BA6NNM3 1639 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 RIMBP3Q9UFD9 1639 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 A0A1B0GV72 72 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 VSTM2BA6NLU5 285 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 KCNK1O00180 336 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 CCRL2O00421 344 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 CCL21O00585 134 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 SLC9A3R1O14745 358 aaPredicted RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 PRKYO43930 277 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 FADS1O60427 444 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 SMIM24O75264 130 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 CLDN11O75508 207 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 FOXH1O75593 365 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 MMP23AO75900 390 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 DCTN3O75935 186 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 CTDNEP1O95476 244 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 CATP04040 527 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 RLN2P04090 185 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 HPNP05981 417 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 UGT2B7P16662 529 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 TBPP20226 339 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 SERPINA2P20848 420 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 F8A1P23610 371 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 GNRHRP30968 328 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 PRKXP51817 358 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 STC1P52823 247 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 RAB8AP61006 207 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 STXBP1P61764 594 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 RPL31P62899 125 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 FAM3AP98173 230 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 ZNF45Q02386 682 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 PRKCDQ05655 676 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 DYNC1I2Q13409 638 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 KRR1Q13601 381 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 GPNMBQ14956 572 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 ARL6IP1Q15041 203 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 CCDC58Q4VC31 144 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 HES5Q5TA89 166 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 OR52E8Q6IFG1 317 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 RWDD4Q6NW29 188 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 RALGPS2Q86X27 583 aaPredicted RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 STK40Q8N2I9 435 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 BPIFB2Q8N4F0 458 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 MREGQ8N565 214 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 C12orf29Q8N999 325 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 KIR2DL5BQ8NHK3 375 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 ZNF502Q8TBZ5 544 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 ZNF721Q8TF20 911 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 RASSF5Q8WWW0 418 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 LZICQ8WZA0 190 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 TESCQ96BS2 214 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 FLYWCH2Q96CP2 140 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 RMND5BQ96G75 393 aaPredicted RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 SEC22AQ96IW7 307 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 CEP170P1Q96L14 293 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 TSNAXQ99598 290 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 APOL4Q9BPW4 351 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 ZNF670Q9BS34 389 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 FAIM2Q9BWQ8 316 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 TMEM59Q9BXS4 323 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 CALN1Q9BXU9 219 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 TRIM4Q9C037 500 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 FAM107BQ9H098 131 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 ARL6Q9H0F7 186 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 SIAEQ9HAT2 523 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 ACP6Q9NPH0 428 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 IFT46Q9NQC8 304 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 XPNPEP1Q9NQW7 623 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms