RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 FAM234AQ9H0X4 552 aa6.46□□□□□ -1.38
LSM2-210ENST00000470086 CACYBPQ9HB71 228 aaKnown RBP6.46□□□□□ -1.38
LSM2-210ENST00000470086 VAPAQ9P0L0 249 aa6.46□□□□□ -1.38
LSM2-210ENST00000470086 KIAA1456Q9P272 454 aa6.46□□□□□ -1.38
LSM2-210ENST00000470086 COA3Q9Y2R0 106 aaPredicted RBP6.46□□□□□ -1.38
LSM2-210ENST00000470086 SNX5Q9Y5X3 404 aa6.46□□□□□ -1.38
LSM2-210ENST00000470086 TEX13CA0A0J9YWL9 993 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 TRAPPC13A5PLN9 417 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 TRIM64CA6NLI5 447 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 CD300LBA8K4G0 201 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 NDUFB3O43676 98 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 NDUFA2O43678 99 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 JTBO76095 146 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 CTXN1P60606 82 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 FADDQ13158 208 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 PAGE3Q5JUK9 113 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 GLYATL3Q5SZD4 288 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 REEP3Q6NUK4 255 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 FAM185AQ8N0U4 392 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 RPP25LQ8N5L8 163 aaKnown RBP6.45□□□□□ -1.38
LSM2-210ENST00000470086 ZNRF1Q8ND25 227 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 KLHL30-AS1Q8NEE0 82 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 OR56B2PQ8NGI1 322 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 OR13C2Q8NGS9 318 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 LIPHQ8WWY8 451 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 LINC00476Q8WZB0 136 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 TAMM41Q96BW9 452 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 ISOC1Q96CN7 298 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 SGTBQ96EQ0 304 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 ITCHQ96J02 903 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 TSSK2Q96PF2 358 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 SLC25A10Q9UBX3 287 aaPredicted RBP6.45□□□□□ -1.38
LSM2-210ENST00000470086 ZNF222Q9UK12 451 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 RPS6KA6Q9UK32 745 aa6.45□□□□□ -1.38
LSM2-210ENST00000470086 IGKV1D-17A0A075B6S4 117 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 H0YAE9 185 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 RAMP3O60896 148 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 HIST1H2ABP04908 130 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 NDUFB7P17568 137 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 RPS27P42677 84 aaKnown RBP6.44□□□□□ -1.38
LSM2-210ENST00000470086 DLX6P56179 175 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 RAB25P57735 213 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 ABCE1P61221 599 aaKnown RBP6.44□□□□□ -1.38
LSM2-210ENST00000470086 SSX2Q16385 188 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 ABCA11PQ4W5N1 156 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 RABL3Q5HYI8 236 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 PTCHD4Q6ZW05 846 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 HIST3H2AQ7L7L0 130 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 TCF23Q7RTU1 214 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 SLC36A1Q7Z2H8 476 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 FAM122BQ7Z309 247 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 HDDC2Q7Z4H3 204 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 CENPVQ7Z7K6 275 aaPredicted RBP6.44□□□□□ -1.38
LSM2-210ENST00000470086 LINC00471Q8N535 108 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 OR4X2Q8NGF9 303 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 ANGPTL6Q8NI99 470 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 GATAD1Q8WUU5 269 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 HIST1H2ACQ93077 130 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 COG8Q96MW5 612 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 NOL4LQ96MY1 436 aaPredicted RBP6.44□□□□□ -1.38
LSM2-210ENST00000470086 COQ7Q99807 217 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 GPR61Q9BZJ8 451 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 SYT4Q9H2B2 425 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 RETNQ9HD89 108 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 SSU72Q9NP77 194 aaKnown RBP6.44□□□□□ -1.38
LSM2-210ENST00000470086 ATPIF1Q9UII2 106 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 LINC00527Q9UJ94 153 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 HAO1Q9UJM8 370 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 ZNF256Q9Y2P7 627 aaPredicted RBP6.44□□□□□ -1.38
LSM2-210ENST00000470086 SF3B6Q9Y3B4 125 aaKnown RBP6.44□□□□□ -1.38
LSM2-210ENST00000470086 SMAD5-AS1Q9Y6J3 95 aa6.44□□□□□ -1.38
LSM2-210ENST00000470086 TMEM247A6NEH6 219 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 F5H5K5 113 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 CDC42EP2O14613 210 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 SIGLEC5O15389 551 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 AKR7A2O43488 359 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 CLIC3O95833 236 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 MUC1P15941 1255 aaPredicted RBP6.43□□□□□ -1.38
LSM2-210ENST00000470086 SLC9A3P48764 834 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 MICBQ29980 383 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 KLHL12Q53G59 568 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 LRRC10Q5BKY1 277 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 LRIF1Q5T3J3 769 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 ATPAF1Q5TC12 328 aaPredicted RBP6.43□□□□□ -1.38
LSM2-210ENST00000470086 PGAP1Q75T13 922 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 MRPL21Q7Z2W9 205 aaKnown RBP6.43□□□□□ -1.38
LSM2-210ENST00000470086 HDXQ7Z353 690 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 WFDC3Q8IUB2 231 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 OR1M1Q8NGA1 313 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 OR52H1Q8NGJ2 320 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 OR9Q1Q8NGQ5 310 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 OR51A7Q8NH64 312 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 RPS4Y2Q8TD47 263 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 TMEM239Q8WW34 195 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 SPRYD4Q8WW59 207 aaPredicted RBP6.43□□□□□ -1.38
LSM2-210ENST00000470086 DDB2Q92466 427 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 MISP3Q96FF7 219 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 ZNF583Q96ND8 569 aa6.43□□□□□ -1.38
LSM2-210ENST00000470086 RAB3IPQ96QF0 476 aaPredicted RBP6.43□□□□□ -1.38
LSM2-210ENST00000470086 RBP7Q96R05 134 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms