RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ACOD1A6NK06 481 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 IFITM5A6NNB3 132 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 CTDSPLO15194 276 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 TPPPO94811 219 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 UBL3O95164 117 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 TRAPPC2P0DI81 140 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 TRAPPC2BP0DI82 140 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 CALCBP10092 127 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 CFPP27918 469 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 FABP6P51161 128 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 UBE2NP61088 152 aaKnown RBP15.22■□□□□ 0.03
MRPL28-208ENST00000469744 ARF1P84077 181 aaKnown RBP15.22■□□□□ 0.03
MRPL28-208ENST00000469744 UBE2NLQ5JXB2 153 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 LRRN1Q6UXK5 716 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 KRT77Q7Z794 578 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 TMEM123Q8N131 208 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 PRSS35Q8N3Z0 413 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 CELF2-AS1Q8N7Q2 184 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 MAPK1IP1LQ8NDC0 245 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 NEDD4LQ96PU5 975 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 CACNG6Q9BXT2 260 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 CRLF2Q9HC73 371 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 GPR35Q9HC97 309 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 TCF7L1Q9HCS4 588 aa15.22■□□□□ 0.03
MRPL28-208ENST00000469744 RBFOX1Q9NWB1 397 aaKnown RBP15.22■□□□□ 0.03
MRPL28-208ENST00000469744 IGHV1-18A0A0C4DH31 117 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 A0A0G2JMP0 313 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 A0A0X1KG70 313 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 SSX4O60224 188 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 PAHP00439 452 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 KIR3DL2P43630 455 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 INPP1P49441 399 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 BIDP55957 195 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 EIF2B1Q14232 305 aaKnown RBP15.21■□□□□ 0.03
MRPL28-208ENST00000469744 ETFDHQ16134 617 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 CEACAM16Q2WEN9 425 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 WDR38Q5JTN6 314 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 C11orf71Q6IPW1 123 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 ANKRD16Q6P6B7 361 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 LRRTM1Q86UE6 522 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 GLB1L2Q8IW92 636 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 FBXL14Q8N1E6 418 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 MUC15Q8N387 334 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 OR4M2Q8NGB6 313 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 OR5H6Q8NGV6 325 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 OR6X1Q8NH79 312 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 MCHR2Q969V1 340 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 RFT1Q96AA3 541 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 GFI1Q99684 422 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 SEC61A2Q9H9S3 476 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 BRD7Q9NPI1 651 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 ETV7Q9Y603 341 aa15.21■□□□□ 0.03
MRPL28-208ENST00000469744 CR1P17927 2039 aa15.21■□□□□ 0.02
MRPL28-208ENST00000469744 HEXAP06865 529 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 DCTDP32321 178 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 MMP15P51511 669 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 SPATC1Q76KD6 591 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 AKAP14Q86UN6 197 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 CATSPERDQ86XM0 798 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 ZNF671Q8TAW3 534 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 ENKURQ8TC29 256 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 HPS1Q92902 700 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 SLC25A44Q96H78 314 aaPredicted RBP15.2■□□□□ 0.02
MRPL28-208ENST00000469744 BOD1Q96IK1 185 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 CBLN4Q9NTU7 201 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 ZNF503-AS2A6NEH8 195 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 RNF223E7ERA6 249 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 RPL36A-HNRNPH2H7BZ11 118 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 LYRM1O43325 122 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 GSTZ1O43708 216 aaPredicted RBP15.2■□□□□ 0.02
MRPL28-208ENST00000469744 SRSF10O75494 262 aaKnown RBP15.2■□□□□ 0.02
MRPL28-208ENST00000469744 IGHG1P01857 330 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 CELA3BP08861 270 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 NR2C1P13056 603 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 SNRPBP14678 240 aaKnown RBP15.2■□□□□ 0.02
MRPL28-208ENST00000469744 CAMK2DQ13557 499 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 MYPOPQ86VE0 399 aaPredicted RBP15.2■□□□□ 0.02
MRPL28-208ENST00000469744 ST7LQ8TDW4 575 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 RAB40AQ8WXH6 277 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 TRIM63Q969Q1 353 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 THAP7Q9BT49 309 aaPredicted RBP15.2■□□□□ 0.02
MRPL28-208ENST00000469744 OBP2BQ9NPH6 170 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 R4GMQ9 66 aa15.2■□□□□ 0.02
MRPL28-208ENST00000469744 HIVEP2P31629 2446 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 ARFGEF3Q5TH69 2177 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 SULT1B1O43704 296 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 ISG15P05161 165 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 CECR9P0C854 216 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 FAM157BP0CG42 384 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 RPS27P42677 84 aaKnown RBP15.19■□□□□ 0.02
MRPL28-208ENST00000469744 SYT9Q86SS6 491 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 C20orf196Q8IYI0 205 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 NOXO1Q8NFA2 376 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 OR10H5Q8NGA6 315 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 LGALS14Q8TCE9 139 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 C15orf40Q8WUR7 153 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 ABCG5Q9H222 651 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 RNF121Q9H920 327 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 LRP12Q9Y561 859 aa15.19■□□□□ 0.02
MRPL28-208ENST00000469744 SONP18583 2426 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms