RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 OR2B8PP59922 312 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 LCN2P80188 198 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 DMC1Q14565 340 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 C5orf64Q2M2E5 130 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 CD300LGQ6UXG3 332 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 TMPRSS11AQ6ZMR5 421 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 MRPL21Q7Z2W9 205 aaKnown RBP2.24□□□□□ -2.05
VPS8-220ENST00000469713 ZNF101Q8IZC7 436 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 LRRC52Q8N7C0 313 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 CDS1Q92903 461 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 CPNE4Q96A23 557 aaPredicted RBP2.24□□□□□ -2.05
VPS8-220ENST00000469713 KIAA1143Q96AT1 154 aaPredicted RBP2.24□□□□□ -2.05
VPS8-220ENST00000469713 RCN3Q96D15 328 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 NAP1L5Q96NT1 182 aaPredicted RBP2.24□□□□□ -2.05
VPS8-220ENST00000469713 NUDT9Q9BW91 350 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 OSBPL11Q9BXB4 747 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 REEP1Q9H902 201 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 CYP3A43Q9HB55 503 aa2.24□□□□□ -2.05
VPS8-220ENST00000469713 FARSAQ9Y285 508 aaKnown RBP2.24□□□□□ -2.05
VPS8-220ENST00000469713 PLEKHG2Q9H7P9 1386 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 A0A0A6YYD5 115 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 ARPC4-TTLL3A0A0A6YYG9 625 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 H3BN98 237 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 M0R1X1 148 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 LGALS9O00182 355 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 CYB5R3P00387 301 aaPredicted RBP2.23□□□□□ -2.05
VPS8-220ENST00000469713 TRBV12-3P01733 135 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 CD5P06127 495 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 GFAPP14136 432 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 PMCHP20382 165 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 PEX19P40855 299 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 OR1G1P47890 313 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 UBE2E1P51965 193 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 PSMD4P55036 377 aaKnown RBP2.23□□□□□ -2.05
VPS8-220ENST00000469713 CMC4P56277 68 aaPredicted RBP2.23□□□□□ -2.05
VPS8-220ENST00000469713 CLDN6P56747 220 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 IFITM3Q01628 133 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 OR1Q1Q15612 314 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 C6orf99Q4VX62 202 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 TPRG1LQ5T0D9 272 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 MLIPQ5VWP3 458 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 GUSBP11Q6P575 273 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 ULK3Q6PHR2 472 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 SLC30A8Q8IWU4 369 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 TMEM105Q8N8V8 129 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 DCAKDQ8WVC6 231 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 UBE2E2Q96LR5 201 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 CHCHD7Q9BUK0 85 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 RGCCQ9H4X1 137 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 ADA2Q9NZK5 511 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 ZMAT5Q9UDW3 170 aaKnown RBP2.23□□□□□ -2.05
VPS8-220ENST00000469713 COL1A2P08123 1366 aa2.23□□□□□ -2.05
VPS8-220ENST00000469713 A0A0B4J2E0 115 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 IGHV1-3A0A0C4DH29 117 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 BTNL10A8MVZ5 291 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 HACD1B0YJ81 288 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 POLR1CO15160 346 aaPredicted RBP2.22□□□□□ -2.05
VPS8-220ENST00000469713 HSPD1P10809 573 aaKnown RBP2.22□□□□□ -2.05
VPS8-220ENST00000469713 SRMP19623 302 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 APLNRP35414 380 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 CFHR2P36980 270 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 YWHAEP62258 255 aaKnown RBP2.22□□□□□ -2.05
VPS8-220ENST00000469713 PAFAH1B2P68402 229 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 NAB1Q13506 487 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 TMEM236Q5W0B7 351 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 KDM4DQ6B0I6 523 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 ERO1BQ86YB8 467 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 DRAM1Q8N682 238 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 FAM184AQ8NB25 1140 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 ST20-AS1Q8NBB2 130 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 OR1L1Q8NH94 360 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 ENKURQ8TC29 256 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 ZNF721Q8TF20 911 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 RXFP2Q8WXD0 754 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 FAM19A4Q96LR4 140 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 IL22Q9GZX6 179 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 ZSCAN16Q9H4T2 348 aaPredicted RBP2.22□□□□□ -2.05
VPS8-220ENST00000469713 DYRK4Q9NR20 520 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 TREX1Q9NSU2 369 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 SIGLEC7Q9Y286 467 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 LRRC42Q9Y546 428 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 OR51B2Q9Y5P1 312 aa2.22□□□□□ -2.05
VPS8-220ENST00000469713 GPR179Q6PRD1 2367 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 LOC100653049A0A140TA62 436 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 MANBAO00462 879 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 GATBO75879 557 aaKnown RBP2.21□□□□□ -2.06
VPS8-220ENST00000469713 KRT34O76011 436 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 IGLV2-8P01709 118 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 IGLV3-19P01714 112 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 KLK1P06870 262 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 PCK1P35558 622 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 BRCA1P38398 1863 aaKnown RBP2.21□□□□□ -2.06
VPS8-220ENST00000469713 KDSRQ06136 332 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 FAM222AQ5U5X8 452 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 Q6ZSR6 202 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 NDUFAF7Q7L592 441 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 MIR7-3HGQ8N6C7 128 aa2.21□□□□□ -2.06
VPS8-220ENST00000469713 WDR31Q8NA23 367 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms