RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 NPY4RP50391 375 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 SUB1P53999 127 aaKnown RBP eCLIP13.48□□□□□ -0.25
LIMS2-213ENST00000469300 TAF9Q16594 264 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 SSX8Q7RTT4 187 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 OR52I2Q8NH67 350 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 DYNC2LI1Q8TCX1 351 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 HAS2Q92819 552 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 C20orf85Q9H1P6 137 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 ING1Q9UK53 422 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-213ENST00000469300 APC2O95996 2303 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 AQP7P3A6NL99 342 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 HBE1P02100 147 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 TMIGD3P0DMS9 266 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-213ENST00000469300 CBR1P16152 277 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 FGF9P31371 208 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-213ENST00000469300 EVX1P49640 407 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 ASAH1Q13510 395 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 NPEPL1Q8NDH3 523 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 DEFB108BQ8NET1 73 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 OR13G1Q8NGZ3 307 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 SAP25Q8TEE9 199 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 DVL3Q92997 716 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-213ENST00000469300 RBMXL1Q96E39 390 aaKnown RBP13.48□□□□□ -0.25
LIMS2-213ENST00000469300 FAM212BQ9NTI7 297 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-213ENST00000469300 EPPINO95925 133 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 HES1Q14469 280 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 C16orf47Q6ZP98 133 aaPredicted RBP13.47□□□□□ -0.25
LIMS2-213ENST00000469300 SLC35G3Q8N808 338 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 FAM181AQ8N9Y4 354 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 OR51S1Q8NGJ8 323 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 OR6S1Q8NH40 331 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 FGF11Q92914 225 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 ST3GAL6Q9Y274 331 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 ZDBF2Q9HCK1 2354 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 SMLR1H3BR10 107 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 SIX6O95475 246 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 MGMTP16455 207 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 SOX8P57073 446 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 B3GNTL1Q67FW5 361 aaPredicted RBP13.47□□□□□ -0.25
LIMS2-213ENST00000469300 BRICD5Q6PL45 260 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 ZNF680Q8NEM1 530 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 CA5BP1Q8WTZ4 195 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 ICAM5Q9UMF0 924 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 MN1Q10571 1320 aaPredicted RBP13.47□□□□□ -0.25
LIMS2-213ENST00000469300 DFFBO76075 338 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 NGFRP08138 427 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 AGFG1P52594 562 aaKnown RBP13.47□□□□□ -0.25
LIMS2-213ENST00000469300 BEX5Q5H9J7 111 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 SOHLH1Q5JUK2 328 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 GABRG1Q8N1C3 465 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 CLRN3Q8NCR9 226 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 C14orf79Q96F83 325 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 SCARF2Q96GP6 870 aaPredicted RBP13.47□□□□□ -0.25
LIMS2-213ENST00000469300 C4orf45Q96LM5 186 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 CHST6Q9GZX3 395 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 ISG20L2Q9H9L3 353 aaKnown RBP13.47□□□□□ -0.25
LIMS2-213ENST00000469300 SLC17A5Q9NRA2 495 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 LAMP3Q9UQV4 416 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 PUS1Q9Y606 427 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIMS2-213ENST00000469300 TMEM235A6NFC5 223 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 RNF151Q2KHN1 245 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 IGSF11Q5DX21 431 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 TSPAN32Q96QS1 320 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 SMIM3Q9BZL3 60 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 PPP1R14DQ9NXH3 145 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 CES1P1Q9UKY3 287 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 PLXNA1Q9UIW2 1896 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 SIPA1L1O43166 1804 aa13.47□□□□□ -0.25
LIMS2-213ENST00000469300 TUBAL3A6NHL2 446 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 SIRPB1O00241 398 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 CYTIPO60759 359 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 SCO1O75880 301 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 EPXP11678 715 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 FAHP16930 419 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 LSM6P62312 80 aaKnown RBP13.46□□□□□ -0.25
LIMS2-213ENST00000469300 SLC23A3Q6PIS1 610 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 OR10R2Q8NGX6 335 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 C2CD4CQ8TF44 421 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 PILRAQ9UKJ1 303 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 EXOGQ9Y2C4 368 aaKnown RBP13.46□□□□□ -0.25
LIMS2-213ENST00000469300 THBS3P49746 956 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 SCAND1P57086 179 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 MLF1P58340 268 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 PHLDA2Q53GA4 152 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 SPINK14Q6IE38 97 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 H2BFWTQ7Z2G1 175 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 SLC36A1Q7Z2H8 476 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 SDSLQ96GA7 329 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 DOK1Q99704 481 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 SHARPINQ9H0F6 387 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 AMDHD2Q9Y303 409 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 UNC13CQ8NB66 2214 aa13.46□□□□□ -0.25
LIMS2-213ENST00000469300 OR6C68A6NDL8 312 aa13.46□□□□□ -0.26
LIMS2-213ENST00000469300 LIPT2A6NK58 231 aa13.46□□□□□ -0.26
LIMS2-213ENST00000469300 SCAF4O95104 1147 aaKnown RBP13.46□□□□□ -0.26
LIMS2-213ENST00000469300 ZNF17P17021 662 aa13.46□□□□□ -0.26
LIMS2-213ENST00000469300 ZNF32P17041 273 aa13.46□□□□□ -0.26
LIMS2-213ENST00000469300 ALOX5APP20292 161 aa13.46□□□□□ -0.26
LIMS2-213ENST00000469300 ATPAF1Q5TC12 328 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms