RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SMCO3A2RU48 225 aa11□□□□□ -0.65
USP11-206ENST00000469080 A8MWP6 167 aa11□□□□□ -0.65
USP11-206ENST00000469080 CA11O75493 328 aa11□□□□□ -0.65
USP11-206ENST00000469080 ARL6IP5O75915 188 aa11□□□□□ -0.65
USP11-206ENST00000469080 MBPP02686 304 aaPredicted RBP11□□□□□ -0.65
USP11-206ENST00000469080 BIDP55957 195 aa11□□□□□ -0.65
USP11-206ENST00000469080 ZNF626Q68DY1 528 aa11□□□□□ -0.65
USP11-206ENST00000469080 OR4A4PQ8NGN8 299 aa11□□□□□ -0.65
USP11-206ENST00000469080 RNASE8Q8TDE3 154 aaKnown RBP11□□□□□ -0.65
USP11-206ENST00000469080 INTS14Q96SY0 518 aa11□□□□□ -0.65
USP11-206ENST00000469080 EGLN1Q9GZT9 426 aa11□□□□□ -0.65
USP11-206ENST00000469080 RHOFQ9HBH0 211 aa11□□□□□ -0.65
USP11-206ENST00000469080 MMP25Q9NPA2 562 aa11□□□□□ -0.65
USP11-206ENST00000469080 CBLN4Q9NTU7 201 aa11□□□□□ -0.65
USP11-206ENST00000469080 RCC2Q9P258 522 aaKnown RBP11□□□□□ -0.65
USP11-206ENST00000469080 KLK11Q9UBX7 282 aa11□□□□□ -0.65
USP11-206ENST00000469080 CHTOPQ9Y3Y2 248 aaKnown RBP11□□□□□ -0.65
USP11-206ENST00000469080 A0A087WZY1 265 aa11□□□□□ -0.65
USP11-206ENST00000469080 C7orf77A4D0Y5 90 aa11□□□□□ -0.65
USP11-206ENST00000469080 UBL3O95164 117 aa11□□□□□ -0.65
USP11-206ENST00000469080 LINC00614P0C842 121 aa11□□□□□ -0.65
USP11-206ENST00000469080 MAPK3P27361 379 aaPredicted RBP11□□□□□ -0.65
USP11-206ENST00000469080 GSK3AP49840 483 aa11□□□□□ -0.65
USP11-206ENST00000469080 NANOS3P60323 173 aaKnown RBP11□□□□□ -0.65
USP11-206ENST00000469080 ZNF74Q16587 644 aa11□□□□□ -0.65
USP11-206ENST00000469080 KHDC3LQ587J8 217 aa11□□□□□ -0.65
USP11-206ENST00000469080 TMEM69Q5SWH9 247 aa11□□□□□ -0.65
USP11-206ENST00000469080 OR56B1Q8NGI3 324 aa11□□□□□ -0.65
USP11-206ENST00000469080 GPR148Q8TDV2 347 aa11□□□□□ -0.65
USP11-206ENST00000469080 TMED6Q8WW62 240 aa11□□□□□ -0.65
USP11-206ENST00000469080 SULT4A1Q9BR01 284 aa11□□□□□ -0.65
USP11-206ENST00000469080 RGCCQ9H4X1 137 aa11□□□□□ -0.65
USP11-206ENST00000469080 TAS2R5Q9NYW4 299 aa11□□□□□ -0.65
USP11-206ENST00000469080 FBXL3Q9UKT7 428 aa11□□□□□ -0.65
USP11-206ENST00000469080 MMP24Q9Y5R2 645 aa11□□□□□ -0.65
USP11-206ENST00000469080 NBEAQ8NFP9 2946 aa11□□□□□ -0.65
USP11-206ENST00000469080 A0A1W2PPE2 198 aa11□□□□□ -0.65
USP11-206ENST00000469080 E9PQ18 207 aa11□□□□□ -0.65
USP11-206ENST00000469080 F5H5K5 113 aa11□□□□□ -0.65
USP11-206ENST00000469080 SIAH2O43255 324 aa11□□□□□ -0.65
USP11-206ENST00000469080 CPN1P15169 458 aa11□□□□□ -0.65
USP11-206ENST00000469080 ZNF28P17035 718 aa11□□□□□ -0.65
USP11-206ENST00000469080 DLSTP36957 453 aa11□□□□□ -0.65
USP11-206ENST00000469080 PRPS1P60891 318 aa11□□□□□ -0.65
USP11-206ENST00000469080 FOXF1Q12946 379 aa11□□□□□ -0.65
USP11-206ENST00000469080 KLF9Q13886 244 aaPredicted RBP11□□□□□ -0.65
USP11-206ENST00000469080 NKPD1Q17RQ9 610 aa11□□□□□ -0.65
USP11-206ENST00000469080 C1orf140Q5VVS0 124 aa11□□□□□ -0.65
USP11-206ENST00000469080 OR2AK2Q8NG84 335 aa11□□□□□ -0.65
USP11-206ENST00000469080 FREM1Q5H8C1 2179 aa11□□□□□ -0.65
USP11-206ENST00000469080 TRAV18A0A075B6X5 111 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 GGT3PA6NGU5 568 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 LILRA5A6NI73 299 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 VSTM2BA6NLU5 285 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 NUDT21O43809 227 aaKnown RBP10.99□□□□□ -0.65
USP11-206ENST00000469080 APLNRP35414 380 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 NR0B2Q15466 257 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 AWAT1Q58HT5 328 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 ZNF529Q6P280 563 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 NDUFAF7Q7L592 441 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 GALNTL5Q7Z4T8 443 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 VASH2Q86V25 355 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 NPEPL1Q8NDH3 523 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 SYNPRQ8TBG9 265 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 TSPAN32Q96QS1 320 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 UBL7Q96S82 380 aaPredicted RBP10.99□□□□□ -0.65
USP11-206ENST00000469080 RBM24Q9BX46 236 aaKnown RBP10.99□□□□□ -0.65
USP11-206ENST00000469080 ZNF160Q9HCG1 818 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 MED17Q9NVC6 651 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 R4GN57 208 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 SEC14L6B5MCN3 397 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 RNASEK-C17orf49H0YIS7 233 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 DDAH2O95865 285 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 JMJD7P0C870 316 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 CTLA4P16410 223 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 MECP2P51608 486 aaKnown RBP10.99□□□□□ -0.65
USP11-206ENST00000469080 NKX6-1P78426 367 aaPredicted RBP10.99□□□□□ -0.65
USP11-206ENST00000469080 AIMP2Q13155 320 aaKnown RBP10.99□□□□□ -0.65
USP11-206ENST00000469080 CBFBQ13951 182 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 SLC10A1Q14973 349 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 CD300LDQ6UXZ3 194 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 SEMA6DQ8NFY4 1073 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 ATG5Q9H1Y0 275 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 ARRDC1-AS1Q9H2J1 176 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 PARD6AQ9NPB6 346 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 C9J4A7 227 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 P2RY10O00398 339 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 NXPH2O95156 264 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 CRHP06850 196 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 TACSTD2P09758 323 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 PNMTP11086 282 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 MNDAP41218 407 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 CXADRP78310 365 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 PJVKQ0ZLH3 352 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 FUT7Q11130 342 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 DPY19L2P2Q6ZN68 376 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 YRDCQ86U90 279 aaKnown RBP10.99□□□□□ -0.65
USP11-206ENST00000469080 OR10AD1Q8NGE0 317 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 OR14K1Q8NGZ2 314 aa10.99□□□□□ -0.65
USP11-206ENST00000469080 RGP1Q92546 391 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms