RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 THAP7Q9BT49 309 aaPredicted RBP16.42■□□□□ 0.22
SMC4-209ENST00000468653 DIABLOQ9NR28 239 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 GPR173Q9NS66 373 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 PTTG3PQ9NZH4 202 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 MYEF2Q9P2K5 600 aaKnown RBP16.42■□□□□ 0.22
SMC4-209ENST00000468653 STARD10Q9Y365 291 aa16.42■□□□□ 0.22
SMC4-209ENST00000468653 CTAG2O75638 210 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 BPNT1O95861 308 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 PTTG1O95997 202 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 NGFP01138 241 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 CBR1P16152 277 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 MMP15P51511 669 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 CLVS2Q5SYC1 327 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 PAQR4Q8N4S7 273 aaPredicted RBP16.41■□□□□ 0.22
SMC4-209ENST00000468653 PNLDC1Q8NA58 520 aaKnown RBP16.41■□□□□ 0.22
SMC4-209ENST00000468653 ATG5Q9H1Y0 275 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 CDH20Q9HBT6 801 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 NEK6Q9HC98 313 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 SH3BGRL2Q9UJC5 107 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 MRPS28Q9Y2Q9 187 aaKnown RBP16.41■□□□□ 0.22
SMC4-209ENST00000468653 ATMQ13315 3056 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 EEF1E1O43324 174 aaKnown RBP16.41■□□□□ 0.22
SMC4-209ENST00000468653 GMDSO60547 372 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 NRASP01111 189 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 CELA3BP08861 270 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 WNT5AP41221 380 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 GK2Q14410 553 aaPredicted RBP16.41■□□□□ 0.22
SMC4-209ENST00000468653 CNN3Q15417 329 aaKnown RBP16.41■□□□□ 0.22
SMC4-209ENST00000468653 KISS1Q15726 138 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 RNASE12Q5GAN4 147 aaKnown RBP16.41■□□□□ 0.22
SMC4-209ENST00000468653 RNF144BQ7Z419 303 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 OR5L1Q8NGL2 311 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 PIGTQ969N2 578 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 REPIN1Q9BWE0 567 aaKnown RBP16.41■□□□□ 0.22
SMC4-209ENST00000468653 C1QTNF6Q9BXI9 259 aa16.41■□□□□ 0.22
SMC4-209ENST00000468653 EIF3KQ9UBQ5 218 aaKnown RBP16.41■□□□□ 0.22
SMC4-209ENST00000468653 ZNF816-ZNF321PA0A0X1KG74 233 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 LDLRAD4O15165 306 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 CTDSPLO15194 276 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 XRCC3O43542 346 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 AGFG2O95081 481 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 HLA-DQB1P01920 261 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 PRKACBP22694 351 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 IL32P24001 234 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 OPRM1P35372 400 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 OR3A4PP47883 348 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 PTH2RP49190 550 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 TAS2R20P59543 309 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 ASAH1Q13510 395 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 ZNF57Q68EA5 555 aaPredicted RBP16.4■□□□□ 0.22
SMC4-209ENST00000468653 OR10K2Q6IF99 312 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 ZNF474Q6S9Z5 364 aaPredicted RBP16.4■□□□□ 0.22
SMC4-209ENST00000468653 ZNF101Q8IZC7 436 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 SSC4DQ8WTU2 575 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 C15orf40Q8WUR7 153 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 PTX4Q96A99 478 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 OR51B6Q9H340 312 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 PRORYQ9H606 182 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 OPA3Q9H6K4 179 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 OBP2BQ9NPH6 170 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 TBCCD1Q9NVR7 557 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 KCNN3Q9UGI6 736 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 RAB22AQ9UL26 194 aa16.4■□□□□ 0.22
SMC4-209ENST00000468653 MED19A0JLT2 244 aaPredicted RBP16.39■□□□□ 0.21
SMC4-209ENST00000468653 GGT3PA6NGU5 568 aa16.39■□□□□ 0.21
SMC4-209ENST00000468653 RAB6AP20340 208 aa16.39■□□□□ 0.21
SMC4-209ENST00000468653 HLXQ14774 488 aaPredicted RBP16.39■□□□□ 0.21
SMC4-209ENST00000468653 ZBTB37Q5TC79 503 aa16.39■□□□□ 0.21
SMC4-209ENST00000468653 GLIPR1L1Q6UWM5 242 aa16.39■□□□□ 0.21
SMC4-209ENST00000468653 MYPOPQ86VE0 399 aaPredicted RBP16.39■□□□□ 0.21
SMC4-209ENST00000468653 PIGCQ92535 297 aa16.39■□□□□ 0.21
SMC4-209ENST00000468653 SPSB1Q96BD6 273 aa16.39■□□□□ 0.21
SMC4-209ENST00000468653 GAL3ST1Q99999 423 aa16.39■□□□□ 0.21
SMC4-209ENST00000468653 ZGRF1Q86YA3 2104 aa16.39■□□□□ 0.21
SMC4-209ENST00000468653 OR5H1A6NKK0 313 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 GSTZ1O43708 216 aaPredicted RBP16.38■□□□□ 0.21
SMC4-209ENST00000468653 TPPPO94811 219 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 BMP5P22003 454 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 MNDAP41218 407 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 DGCR2P98153 550 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 TMEM42Q69YG0 159 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 GDPD3Q7L5L3 318 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 OR56B2PQ8NGI1 322 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 AMDHD2Q9Y303 409 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 RP1L1Q8IWN7 2480 aaPredicted RBP16.38■□□□□ 0.21
SMC4-209ENST00000468653 FAM230AA0A1W2PPH8 454 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 TMEM8BA6NDV4 472 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 MSTNO14793 375 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 LANCL1O43813 399 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 KDM4BO94953 1096 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 CD3GP09693 182 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 VSIG8P0DPA2 414 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 MTCP1P56278 107 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 RFPL4BQ6ZWI9 263 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 MOB3CQ70IA8 216 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 OR5D18Q8NGL1 313 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 SMIM4Q8WVI0 70 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 TRIM63Q969Q1 353 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 ITFG2Q969R8 447 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 CPNE2Q96FN4 548 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms