RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 CRCPO75575 148 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 NDUFB2O95178 105 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 RAB36O95755 333 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 PGA5P0DJD9 388 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 C1GALT1C1LP0DN25 315 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 CCL2P13500 99 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 TNFRSF1BP20333 461 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 MDH1P40925 334 aaKnown RBP3.58□□□□□ -1.84
HMGB1-207ENST00000468384 ENTPD1P49961 510 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 SLC35B1P78383 322 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 H3F3AP84243 136 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 CHIT1Q13231 466 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 RIPK1Q13546 671 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 TOMM34Q15785 309 aaPredicted RBP3.58□□□□□ -1.84
HMGB1-207ENST00000468384 ZNF718Q3SXZ3 478 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 TMEM35AQ53FP2 167 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 THEM4Q5T1C6 240 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB1-207ENST00000468384 OR4C11Q6IEV9 310 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 FAM45BPQ6NSW5 357 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 ZYG11AQ6WRX3 759 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 CREB3L2Q70SY1 520 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 CCDC80Q76M96 950 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 SLC16A14Q7RTX9 510 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 NR2C2APQ86WQ0 139 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 ZDHHC21Q8IVQ6 265 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 IQCF2Q8IXL9 164 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 LINC00301Q8NCQ3 95 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 OR2Z1Q8NG97 314 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 OR56B2PQ8NGI1 322 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 OR1J1Q8NGS3 322 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 FAM45AQ8TCE6 357 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 AKR1E2Q96JD6 320 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 RNF157Q96PX1 679 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 OR2V2Q96R30 315 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 ZNF607Q96SK3 696 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 KRTAP1-5Q9BYS1 174 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 GBA3Q9H227 469 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 NCOR1P1Q9H4R4 102 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 NT5DC2Q9H857 520 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 WDR41Q9HAD4 459 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 PARVBQ9HBI1 364 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 IL36RNQ9UBH0 155 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 STUB1Q9UNE7 303 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 JRKLQ9Y4A0 524 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 ASB4Q9Y574 426 aa3.58□□□□□ -1.84
HMGB1-207ENST00000468384 A0A0G2JPF8 293 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 ELOVL7A1L3X0 281 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 HNRNPCL3B7ZW38 293 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 G3V2L1 256 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 RPL36A-HNRNPH2H7BZ11 118 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 SLC22A2O15244 555 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 SURF4O15260 269 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 GNA14O95837 355 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 NUDT14O95848 222 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 MT-ATP6P00846 226 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 ATP1B1P05026 303 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 SERPINA5P05154 406 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 CTAGE8P0CG41 777 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 HNRNPCL4P0DMR1 293 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 UMPSP11172 480 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 TAGLN2P37802 199 aaKnown RBP3.57□□□□□ -1.84
HMGB1-207ENST00000468384 HTR6P50406 440 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 CCR4P51679 360 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 BRWD1-AS2P59051 145 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 TRAP1Q12931 704 aaKnown RBP3.57□□□□□ -1.84
HMGB1-207ENST00000468384 GAMTQ14353 236 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 TGFBIQ15582 683 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 LTB4RQ15722 352 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 ZKSCAN8Q15776 578 aaPredicted RBP3.57□□□□□ -1.84
HMGB1-207ENST00000468384 DUSP5Q16690 384 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 TTLL9Q3SXZ7 439 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 MTX3Q5HYI7 312 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 SPATA46Q5T0L3 261 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 KLC3Q6P597 504 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 RBM43Q6ZSC3 357 aaKnown RBP3.57□□□□□ -1.84
HMGB1-207ENST00000468384 C16orf82Q7Z2V1 217 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 COMMD2Q86X83 199 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 CTAGE4Q8IX94 777 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 KDM8Q8N371 416 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 ZCCHC7Q8N3Z6 543 aaKnown RBP3.57□□□□□ -1.84
HMGB1-207ENST00000468384 GBGT1Q8N5D6 347 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 THAP8Q8NA92 274 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 SLC30A7Q8NEW0 376 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 OR9K2Q8NGE7 335 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 ANKRD49Q8WVL7 239 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 UBLCP1Q8WVY7 318 aaPredicted RBP3.57□□□□□ -1.84
HMGB1-207ENST00000468384 CAPSLQ8WWF8 208 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 ZNF524Q96C55 264 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 VAT1Q99536 393 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 ATG101Q9BSB4 218 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 MS4A8Q9BY19 250 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 WFDC10AQ9H1F0 79 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 METTL8Q9H825 291 aaKnown RBP3.57□□□□□ -1.84
HMGB1-207ENST00000468384 NMRK1Q9NWW6 199 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 FBXL3Q9UKT7 428 aa3.57□□□□□ -1.84
HMGB1-207ENST00000468384 NBDYA0A0U1RRE5 68 aa3.56□□□□□ -1.84
HMGB1-207ENST00000468384 LRRC30A6NM36 301 aa3.56□□□□□ -1.84
HMGB1-207ENST00000468384 E5RI56 91 aa3.56□□□□□ -1.84
HMGB1-207ENST00000468384 H0Y980 276 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms